Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRKDCP78527 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRKDCP78527 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKDCP78527 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKDCP78527 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKDCP78527 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PRKDCP78527 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKDCP78527 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC4.22□□□□□ -1.73
PRKDCP78527 AR-208ENST00000612452 10676 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKDCP78527 SNURFL-201ENST00000309296 343 ntBASIC4.22□□□□□ -1.73
PRKDCP78527 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKDCP78527 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PRKDCP78527 RNU1-46P-201ENST00000384425 164 ntBASIC4.22□□□□□ -1.73
PRKDCP78527 AL357752.1-201ENST00000412817 349 ntBASIC4.22□□□□□ -1.73
PRKDCP78527 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKDCP78527 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKDCP78527 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKDCP78527 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKDCP78527 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PRKDCP78527 RN7SL481P-201ENST00000477764 299 ntBASIC4.22□□□□□ -1.73
PRKDCP78527 RPL7AP10-201ENST00000481016 791 ntBASIC4.22□□□□□ -1.73
PRKDCP78527 HPRT1P1-201ENST00000509498 657 ntBASIC4.22□□□□□ -1.73
PRKDCP78527 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKDCP78527 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.22□□□□□ -1.73
PRKDCP78527 MIR4429-201ENST00000580105 73 ntBASIC4.22□□□□□ -1.73
PRKDCP78527 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKDCP78527 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC4.22□□□□□ -1.73
PRKDCP78527 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.22□□□□□ -1.73
PRKDCP78527 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRKDCP78527 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRKDCP78527 PCDHA4-204ENST00000618834 10557 ntBASIC4.22□□□□□ -1.73
PRKDCP78527 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRKDCP78527 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.21□□□□□ -1.73
PRKDCP78527 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PRKDCP78527 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
PRKDCP78527 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
PRKDCP78527 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.73
PRKDCP78527 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKDCP78527 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKDCP78527 RPS23P7-201ENST00000466210 444 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
PRKDCP78527 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKDCP78527 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 AC013701.1-201ENST00000522657 465 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 RPA2P3-201ENST00000533268 770 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.21□□□□□ -1.74
PRKDCP78527 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 ITIH5-202ENST00000397146 6721 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 ANKRD50-201ENST00000504087 8794 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 AL133325.1-201ENST00000421090 382 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PRKDCP78527 DEFA11P-201ENST00000446470 261 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 AC109462.1-201ENST00000491087 368 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 GTF2IP11-201ENST00000526931 420 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.21□□□□□ -1.74
PRKDCP78527 AC068724.3-201ENST00000625906 87 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC4.21□□□□□ -1.74
PRKDCP78527 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC4.21□□□□□ -1.74
PRKDCP78527 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRKDCP78527 AC012512.1-201ENST00000446594 718 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 RPS18P6-201ENST00000476880 458 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 OR5AN2P-201ENST00000534535 896 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 AC073916.1-201ENST00000545095 130 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.21□□□□□ -1.74
PRKDCP78527 AL953862.2-201ENST00000603089 820 ntBASIC4.21□□□□□ -1.74
PRKDCP78527 AC012653.2-201ENST00000621880 420 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms