Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.94□□□□□ -1.3
VCPP55072 AL451136.1-201ENST00000435399 325 ntBASIC6.94□□□□□ -1.3
VCPP55072 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 RPL26P30-201ENST00000453533 435 ntBASIC6.94□□□□□ -1.3
VCPP55072 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.94□□□□□ -1.3
VCPP55072 AC026774.2-201ENST00000513990 1098 ntBASIC6.94□□□□□ -1.3
VCPP55072 RNA5SP116-201ENST00000516132 98 ntBASIC6.94□□□□□ -1.3
VCPP55072 TRIM77BP-201ENST00000524985 1119 ntBASIC6.94□□□□□ -1.3
VCPP55072 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.94□□□□□ -1.3
VCPP55072 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.94□□□□□ -1.3
VCPP55072 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
VCPP55072 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.94□□□□□ -1.3
VCPP55072 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
VCPP55072 SNORD96A-201ENST00000606577 79 ntBASIC6.94□□□□□ -1.3
VCPP55072 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.94□□□□□ -1.3
VCPP55072 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.94□□□□□ -1.3
VCPP55072 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.94□□□□□ -1.3
VCPP55072 AL035425.4-201ENST00000624509 1063 ntBASIC6.94□□□□□ -1.3
VCPP55072 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
VCPP55072 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 AC053481.2-202ENST00000582394 1500 ntBASIC6.94□□□□□ -1.3
VCPP55072 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.94□□□□□ -1.3
VCPP55072 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.94□□□□□ -1.3
VCPP55072 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.94□□□□□ -1.3
VCPP55072 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.94□□□□□ -1.3
VCPP55072 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
VCPP55072 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
VCPP55072 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.93□□□□□ -1.3
VCPP55072 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
VCPP55072 RNA5SP321-201ENST00000362722 111 ntBASIC6.93□□□□□ -1.3
VCPP55072 U3.52-201ENST00000384034 216 ntBASIC6.93□□□□□ -1.3
VCPP55072 AC087752.1-201ENST00000391360 558 ntBASIC6.93□□□□□ -1.3
VCPP55072 AC017035.1-201ENST00000411999 1115 ntBASIC6.93□□□□□ -1.3
VCPP55072 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 AC092865.3-201ENST00000425390 1026 ntBASIC6.93□□□□□ -1.3
VCPP55072 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.93□□□□□ -1.3
VCPP55072 COX4I1P2-201ENST00000447446 547 ntBASIC6.93□□□□□ -1.3
VCPP55072 H3F3AP3-201ENST00000497682 407 ntBASIC6.93□□□□□ -1.3
VCPP55072 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.93□□□□□ -1.3
VCPP55072 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.93□□□□□ -1.3
VCPP55072 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.93□□□□□ -1.3
VCPP55072 IGLV3-6-201ENST00000523937 250 ntBASIC6.93□□□□□ -1.3
VCPP55072 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VCPP55072 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.93□□□□□ -1.3
VCPP55072 AL445383.1-201ENST00000554689 874 ntBASIC6.93□□□□□ -1.3
VCPP55072 AC106785.4-201ENST00000569492 412 ntBASIC6.93□□□□□ -1.3
VCPP55072 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.93□□□□□ -1.3
VCPP55072 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.93□□□□□ -1.3
VCPP55072 AL357153.4-201ENST00000620487 1016 ntBASIC6.93□□□□□ -1.3
VCPP55072 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.93□□□□□ -1.3
VCPP55072 AC063952.1-203ENST00000634410 658 ntBASIC6.93□□□□□ -1.3
VCPP55072 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VCPP55072 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VCPP55072 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VCPP55072 AL139384.2-201ENST00000613809 3590 ntBASIC6.93□□□□□ -1.3
VCPP55072 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.93□□□□□ -1.3
VCPP55072 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.93□□□□□ -1.3
VCPP55072 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
VCPP55072 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VCPP55072 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
VCPP55072 AL731556.1-201ENST00000394628 3711 ntBASIC6.92□□□□□ -1.3
VCPP55072 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VCPP55072 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VCPP55072 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VCPP55072 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.92□□□□□ -1.3
VCPP55072 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
VCPP55072 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VCPP55072 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VCPP55072 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.92□□□□□ -1.3
VCPP55072 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
VCPP55072 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.92□□□□□ -1.3
VCPP55072 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
VCPP55072 COX6B1P3-201ENST00000312310 260 ntBASIC6.92□□□□□ -1.3
VCPP55072 MIR937-201ENST00000401271 86 ntBASIC6.92□□□□□ -1.3
VCPP55072 CDY17P-201ENST00000414121 1282 ntBASIC6.92□□□□□ -1.3
VCPP55072 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.92□□□□□ -1.3
VCPP55072 BX510359.3-201ENST00000422168 306 ntBASIC6.92□□□□□ -1.3
VCPP55072 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.92□□□□□ -1.3
VCPP55072 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VCPP55072 GAPDHP48-201ENST00000436626 961 ntBASIC6.92□□□□□ -1.3
VCPP55072 SBDSP1-204ENST00000453858 737 ntBASIC6.92□□□□□ -1.3
VCPP55072 RPL23AP68-201ENST00000480924 445 ntBASIC6.92□□□□□ -1.3
VCPP55072 PPIAP19-201ENST00000486414 492 ntBASIC6.92□□□□□ -1.3
VCPP55072 MTND6P8-201ENST00000503471 522 ntBASIC6.92□□□□□ -1.3
VCPP55072 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms