Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CASP4P49662 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CASP4P49662 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CASP4P49662 AP000641.1-201ENST00000531988 1639 ntBASIC6.79□□□□□ -1.32
CASP4P49662 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.79□□□□□ -1.32
CASP4P49662 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CASP4P49662 EIF3EP1-201ENST00000433978 1316 ntBASIC6.79□□□□□ -1.32
CASP4P49662 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CASP4P49662 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CASP4P49662 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
CASP4P49662 AC009831.5-201ENST00000624000 3189 ntBASIC6.79□□□□□ -1.32
CASP4P49662 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CASP4P49662 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.79□□□□□ -1.32
CASP4P49662 RN7SKP250-201ENST00000363924 321 ntBASIC6.79□□□□□ -1.32
CASP4P49662 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CASP4P49662 LCN1P2-201ENST00000372030 223 ntBASIC6.79□□□□□ -1.32
CASP4P49662 SNORA70H-201ENST00000383910 135 ntBASIC6.79□□□□□ -1.32
CASP4P49662 SNORA70J-201ENST00000384182 135 ntBASIC6.79□□□□□ -1.32
CASP4P49662 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 RNA5SP198-201ENST00000410376 127 ntBASIC6.79□□□□□ -1.32
CASP4P49662 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 THEM7P-201ENST00000419556 672 ntBASIC6.79□□□□□ -1.32
CASP4P49662 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 AC013403.1-201ENST00000436954 263 ntBASIC6.79□□□□□ -1.32
CASP4P49662 GAPDHP23-201ENST00000444823 993 ntBASIC6.79□□□□□ -1.32
CASP4P49662 POU5F1P5-201ENST00000445059 658 ntBASIC6.79□□□□□ -1.32
CASP4P49662 RN7SL552P-201ENST00000462094 276 ntBASIC6.79□□□□□ -1.32
CASP4P49662 RPL9P15-201ENST00000491096 532 ntBASIC6.79□□□□□ -1.32
CASP4P49662 KHDC1P1-201ENST00000511053 508 ntBASIC6.79□□□□□ -1.32
CASP4P49662 HMGN1P17-201ENST00000513734 295 ntBASIC6.79□□□□□ -1.32
CASP4P49662 Y_RNA.710-201ENST00000516975 110 ntBASIC6.79□□□□□ -1.32
CASP4P49662 RNA5SP400-201ENST00000517155 111 ntBASIC6.79□□□□□ -1.32
CASP4P49662 RPA2P3-201ENST00000533268 770 ntBASIC6.79□□□□□ -1.32
CASP4P49662 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.79□□□□□ -1.32
CASP4P49662 BMS1P16-201ENST00000556075 1147 ntBASIC6.79□□□□□ -1.32
CASP4P49662 AC004232.2-201ENST00000574245 821 ntBASIC6.79□□□□□ -1.32
CASP4P49662 RNU4ATAC-201ENST00000580972 127 ntBASIC6.79□□□□□ -1.32
CASP4P49662 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.79□□□□□ -1.32
CASP4P49662 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.79□□□□□ -1.32
CASP4P49662 AC005828.7-201ENST00000607331 556 ntBASIC6.79□□□□□ -1.32
CASP4P49662 MIR6889-201ENST00000613185 59 ntBASIC6.79□□□□□ -1.32
CASP4P49662 MIR6811-201ENST00000620409 58 ntBASIC6.79□□□□□ -1.32
CASP4P49662 AC003992.1-201ENST00000635364 557 ntBASIC6.79□□□□□ -1.32
CASP4P49662 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CASP4P49662 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.79□□□□□ -1.32
CASP4P49662 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CASP4P49662 CDY3P-201ENST00000454543 1618 ntBASIC6.79□□□□□ -1.32
CASP4P49662 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CASP4P49662 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CASP4P49662 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.78□□□□□ -1.32
CASP4P49662 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
CASP4P49662 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 AL121768.1-201ENST00000613917 2544 ntBASIC6.78□□□□□ -1.32
CASP4P49662 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 USP9YP3-201ENST00000434481 1766 ntBASIC6.78□□□□□ -1.32
CASP4P49662 SHQ1P1-201ENST00000437111 1544 ntBASIC6.78□□□□□ -1.32
CASP4P49662 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CASP4P49662 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CASP4P49662 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 RNA5SP279-201ENST00000365513 117 ntBASIC6.78□□□□□ -1.32
CASP4P49662 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.78□□□□□ -1.32
CASP4P49662 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
CASP4P49662 RPS14P4-201ENST00000415880 418 ntBASIC6.78□□□□□ -1.32
CASP4P49662 RPS17P17-201ENST00000419392 409 ntBASIC6.78□□□□□ -1.32
CASP4P49662 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 AC096632.2-201ENST00000438139 1239 ntBASIC6.78□□□□□ -1.32
CASP4P49662 PPIAP10-201ENST00000438675 458 ntBASIC6.78□□□□□ -1.32
CASP4P49662 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.78□□□□□ -1.32
CASP4P49662 SNX18P24-201ENST00000505249 671 ntBASIC6.78□□□□□ -1.32
CASP4P49662 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.78□□□□□ -1.32
CASP4P49662 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.78□□□□□ -1.32
CASP4P49662 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.78□□□□□ -1.32
CASP4P49662 AC036111.2-201ENST00000533247 901 ntBASIC6.78□□□□□ -1.32
CASP4P49662 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.78□□□□□ -1.32
CASP4P49662 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.78□□□□□ -1.32
CASP4P49662 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.78□□□□□ -1.32
CASP4P49662 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.78□□□□□ -1.32
CASP4P49662 DYNLL1P1-201ENST00000595442 269 ntBASIC6.78□□□□□ -1.32
CASP4P49662 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.78□□□□□ -1.32
CASP4P49662 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.78□□□□□ -1.32
CASP4P49662 AL137067.2-201ENST00000621202 131 ntBASIC6.78□□□□□ -1.32
CASP4P49662 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.78□□□□□ -1.32
CASP4P49662 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.78□□□□□ -1.32
CASP4P49662 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.78□□□□□ -1.32
CASP4P49662 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.78□□□□□ -1.32
CASP4P49662 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CASP4P49662 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms