Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC119674.1-213ENST00000641177 1386 ntBASIC5.96□□□□□ -1.45
SOX3P41225 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.96□□□□□ -1.45
SOX3P41225 AC074141.1-201ENST00000588129 2995 ntBASIC5.96□□□□□ -1.46
SOX3P41225 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX3P41225 RPL11P4-201ENST00000332269 436 ntBASIC5.96□□□□□ -1.46
SOX3P41225 SNORD35A-201ENST00000363389 86 ntBASIC5.96□□□□□ -1.46
SOX3P41225 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX3P41225 AL391419.1-201ENST00000398901 1275 ntBASIC5.96□□□□□ -1.46
SOX3P41225 AL451046.1-201ENST00000406097 534 ntBASIC5.96□□□□□ -1.46
SOX3P41225 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX3P41225 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX3P41225 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX3P41225 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX3P41225 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX3P41225 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 H3F3AP5-201ENST00000475267 429 ntBASIC5.96□□□□□ -1.46
SOX3P41225 MARK2P8-201ENST00000476069 952 ntBASIC5.96□□□□□ -1.46
SOX3P41225 AC005017.1-201ENST00000482002 490 ntBASIC5.96□□□□□ -1.46
SOX3P41225 GM2AP2-201ENST00000491764 562 ntBASIC5.96□□□□□ -1.46
SOX3P41225 RN7SL649P-201ENST00000496974 275 ntBASIC5.96□□□□□ -1.46
SOX3P41225 HMGN1P16-201ENST00000508308 283 ntBASIC5.96□□□□□ -1.46
SOX3P41225 RNA5SP418-201ENST00000515951 117 ntBASIC5.96□□□□□ -1.46
SOX3P41225 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.96□□□□□ -1.46
SOX3P41225 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 AC023968.1-201ENST00000560719 475 ntBASIC5.96□□□□□ -1.46
SOX3P41225 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX3P41225 AC026898.1-201ENST00000586404 571 ntBASIC5.96□□□□□ -1.46
SOX3P41225 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 AL359091.2-201ENST00000609303 556 ntBASIC5.96□□□□□ -1.46
SOX3P41225 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 AC010325.3-201ENST00000641084 394 ntBASIC5.96□□□□□ -1.46
SOX3P41225 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX3P41225 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX3P41225 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.96□□□□□ -1.46
SOX3P41225 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX3P41225 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX3P41225 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SOX3P41225 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX3P41225 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX3P41225 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SOX3P41225 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SOX3P41225 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SOX3P41225 SAGE3P-201ENST00000619800 1635 ntBASIC5.96□□□□□ -1.46
SOX3P41225 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX3P41225 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX3P41225 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 RNA5SP232-201ENST00000364144 119 ntBASIC5.95□□□□□ -1.46
SOX3P41225 RN7SKP281-201ENST00000410472 352 ntBASIC5.95□□□□□ -1.46
SOX3P41225 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX3P41225 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX3P41225 AC002127.1-201ENST00000421305 225 ntBASIC5.95□□□□□ -1.46
SOX3P41225 SUMO2P8-201ENST00000434672 286 ntBASIC5.95□□□□□ -1.46
SOX3P41225 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 EEF1B2P3-201ENST00000447718 678 ntBASIC5.95□□□□□ -1.46
SOX3P41225 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 RN7SL165P-201ENST00000477476 291 ntBASIC5.95□□□□□ -1.46
SOX3P41225 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX3P41225 SNORA74.1-201ENST00000516320 180 ntBASIC5.95□□□□□ -1.46
SOX3P41225 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX3P41225 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.95□□□□□ -1.46
SOX3P41225 AP001804.1-201ENST00000526868 919 ntBASIC5.95□□□□□ -1.46
SOX3P41225 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.95□□□□□ -1.46
SOX3P41225 OR4A6P-201ENST00000534364 970 ntBASIC5.95□□□□□ -1.46
SOX3P41225 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX3P41225 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX3P41225 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 RN7SL230P-201ENST00000580835 303 ntBASIC5.95□□□□□ -1.46
SOX3P41225 AL589863.1-201ENST00000595383 631 ntBASIC5.95□□□□□ -1.46
SOX3P41225 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX3P41225 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.95□□□□□ -1.46
SOX3P41225 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX3P41225 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SOX3P41225 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.95□□□□□ -1.46
SOX3P41225 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
SOX3P41225 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.95□□□□□ -1.46
SOX3P41225 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SOX3P41225 AC062022.1-201ENST00000451026 1684 ntBASIC5.94□□□□□ -1.46
SOX3P41225 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms