Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RN7SL261P-201ENST00000613441 282 ntBASIC5.9□□□□□ -1.46
RFC3P40938 AL109924.4-201ENST00000623089 670 ntBASIC5.9□□□□□ -1.46
RFC3P40938 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.9□□□□□ -1.46
RFC3P40938 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
RFC3P40938 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RFC3P40938 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.9□□□□□ -1.47
RFC3P40938 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RFC3P40938 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
RFC3P40938 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RFC3P40938 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.9□□□□□ -1.47
RFC3P40938 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RFC3P40938 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RFC3P40938 IFIT1P1-201ENST00000400497 1449 ntBASIC5.9□□□□□ -1.47
RFC3P40938 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.9□□□□□ -1.47
RFC3P40938 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
RFC3P40938 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RFC3P40938 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.9□□□□□ -1.47
RFC3P40938 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.9□□□□□ -1.47
RFC3P40938 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
RFC3P40938 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.89□□□□□ -1.47
RFC3P40938 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.89□□□□□ -1.47
RFC3P40938 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
RFC3P40938 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.89□□□□□ -1.47
RFC3P40938 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.89□□□□□ -1.47
RFC3P40938 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
RFC3P40938 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.89□□□□□ -1.47
RFC3P40938 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.89□□□□□ -1.47
RFC3P40938 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.89□□□□□ -1.47
RFC3P40938 GCNT1P4-201ENST00000404096 329 ntBASIC5.89□□□□□ -1.47
RFC3P40938 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RFC3P40938 PSMD10P2-201ENST00000432890 672 ntBASIC5.89□□□□□ -1.47
RFC3P40938 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.89□□□□□ -1.47
RFC3P40938 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RFC3P40938 RPL23AP64-201ENST00000469465 435 ntBASIC5.89□□□□□ -1.47
RFC3P40938 AP002884.1-201ENST00000479691 655 ntBASIC5.89□□□□□ -1.47
RFC3P40938 RPL23AP68-201ENST00000480924 445 ntBASIC5.89□□□□□ -1.47
RFC3P40938 RPL17P2-201ENST00000491913 451 ntBASIC5.89□□□□□ -1.47
RFC3P40938 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.89□□□□□ -1.47
RFC3P40938 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.89□□□□□ -1.47
RFC3P40938 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 RN7SL475P-201ENST00000583379 298 ntBASIC5.89□□□□□ -1.47
RFC3P40938 GLYATL1P2-202ENST00000588046 902 ntBASIC5.89□□□□□ -1.47
RFC3P40938 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.89□□□□□ -1.47
RFC3P40938 AC073046.2-201ENST00000604756 527 ntBASIC5.89□□□□□ -1.47
RFC3P40938 AP001264.1-201ENST00000620602 703 ntBASIC5.89□□□□□ -1.47
RFC3P40938 AP001157.1-201ENST00000550837 2339 ntBASIC5.89□□□□□ -1.47
RFC3P40938 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.89□□□□□ -1.47
RFC3P40938 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RFC3P40938 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFC3P40938 AC020658.2-201ENST00000559030 4020 ntBASIC5.89□□□□□ -1.47
RFC3P40938 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.89□□□□□ -1.47
RFC3P40938 RPL31P11-201ENST00000426558 1558 ntBASIC5.89□□□□□ -1.47
RFC3P40938 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.88□□□□□ -1.47
RFC3P40938 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 AC007485.2-201ENST00000623493 1667 ntBASIC5.88□□□□□ -1.47
RFC3P40938 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.88□□□□□ -1.47
RFC3P40938 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.88□□□□□ -1.47
RFC3P40938 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RFC3P40938 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.88□□□□□ -1.47
RFC3P40938 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.88□□□□□ -1.47
RFC3P40938 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RFC3P40938 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RFC3P40938 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFC3P40938 RNA5SP333-201ENST00000363466 118 ntBASIC5.88□□□□□ -1.47
RFC3P40938 RNA5SP334-201ENST00000364825 118 ntBASIC5.88□□□□□ -1.47
RFC3P40938 MIR541-201ENST00000401360 84 ntBASIC5.88□□□□□ -1.47
RFC3P40938 RPL34P27-201ENST00000428810 349 ntBASIC5.88□□□□□ -1.47
RFC3P40938 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC3P40938 RPSAP40-201ENST00000442343 891 ntBASIC5.88□□□□□ -1.47
RFC3P40938 OR2L9P-201ENST00000444456 913 ntBASIC5.88□□□□□ -1.47
RFC3P40938 POU5F1P5-201ENST00000445059 658 ntBASIC5.88□□□□□ -1.47
RFC3P40938 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC3P40938 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC3P40938 ZNF519P4-201ENST00000514008 125 ntBASIC5.88□□□□□ -1.47
RFC3P40938 HSD3BP3-201ENST00000514706 994 ntBASIC5.88□□□□□ -1.47
RFC3P40938 RNA5SP206-201ENST00000516703 121 ntBASIC5.88□□□□□ -1.47
RFC3P40938 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC3P40938 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC3P40938 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.88□□□□□ -1.47
RFC3P40938 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.88□□□□□ -1.47
RFC3P40938 AC023968.1-201ENST00000560719 475 ntBASIC5.88□□□□□ -1.47
RFC3P40938 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.88□□□□□ -1.47
RFC3P40938 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms