Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RXRBP28702 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RXRBP28702 AC010401.2-201ENST00000575137 4934 ntBASIC8.71□□□□□ -1.02
RXRBP28702 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
RXRBP28702 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.71□□□□□ -1.02
RXRBP28702 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
RXRBP28702 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RXRBP28702 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.71□□□□□ -1.02
RXRBP28702 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.7□□□□□ -1.02
RXRBP28702 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.7□□□□□ -1.02
RXRBP28702 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.7□□□□□ -1.02
RXRBP28702 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 MAPK10-261ENST00000641050 3109 ntBASIC8.7□□□□□ -1.02
RXRBP28702 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
RXRBP28702 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
RXRBP28702 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC8.7□□□□□ -1.02
RXRBP28702 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 SNORA70.3-201ENST00000365075 132 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 MTND4P22-201ENST00000413116 1169 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AC244452.1-201ENST00000413798 141 ntBASIC8.7□□□□□ -1.02
RXRBP28702 VN1R21P-201ENST00000426703 765 ntBASIC8.7□□□□□ -1.02
RXRBP28702 BX119321.1-201ENST00000428912 797 ntBASIC8.7□□□□□ -1.02
RXRBP28702 HNRNPA1P18-201ENST00000433537 927 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 RSL24D1P3-201ENST00000449255 495 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AC091685.2-201ENST00000454924 864 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 AC096992.1-201ENST00000459808 709 ntBASIC8.7□□□□□ -1.02
RXRBP28702 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC8.7□□□□□ -1.02
RXRBP28702 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
RXRBP28702 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 REXO2-218ENST00000544827 880 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 AC139697.1-201ENST00000548429 745 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 RPA2P1-201ENST00000556557 721 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 MIR1269B-201ENST00000580405 75 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC8.7□□□□□ -1.02
RXRBP28702 AC138473.1-201ENST00000605717 526 ntBASIC8.7□□□□□ -1.02
RXRBP28702 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
RXRBP28702 AC008121.2-201ENST00000614647 523 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AL512506.2-201ENST00000624472 458 ntBASIC8.7□□□□□ -1.02
RXRBP28702 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 AC023632.6-201ENST00000624338 2177 ntBASIC8.7□□□□□ -1.02
RXRBP28702 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
RXRBP28702 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC8.7□□□□□ -1.02
RXRBP28702 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 MTND4P4-201ENST00000439033 1366 ntBASIC8.7□□□□□ -1.02
RXRBP28702 MTND4P10-201ENST00000446199 1363 ntBASIC8.7□□□□□ -1.02
RXRBP28702 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.7□□□□□ -1.02
RXRBP28702 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
RXRBP28702 TTC3P1-201ENST00000399586 6081 ntBASIC8.7□□□□□ -1.02
RXRBP28702 C4BPAP1-201ENST00000415474 1893 ntBASIC8.7□□□□□ -1.02
RXRBP28702 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.7□□□□□ -1.02
RXRBP28702 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
RXRBP28702 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.7□□□□□ -1.02
RXRBP28702 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
RXRBP28702 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.7□□□□□ -1.02
RXRBP28702 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.69□□□□□ -1.02
RXRBP28702 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.69□□□□□ -1.02
RXRBP28702 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 AC103591.2-201ENST00000265259 766 ntBASIC8.69□□□□□ -1.02
RXRBP28702 TMSB4XP2-201ENST00000335179 210 ntBASIC8.69□□□□□ -1.02
RXRBP28702 RNU6-883P-201ENST00000384597 107 ntBASIC8.69□□□□□ -1.02
RXRBP28702 MTCO2P31-201ENST00000402702 684 ntBASIC8.69□□□□□ -1.02
RXRBP28702 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RXRBP28702 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.69□□□□□ -1.02
RXRBP28702 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.69□□□□□ -1.02
RXRBP28702 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC8.69□□□□□ -1.02
RXRBP28702 AL022100.1-202ENST00000421214 548 ntBASIC8.69□□□□□ -1.02
RXRBP28702 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC8.69□□□□□ -1.02
RXRBP28702 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.69□□□□□ -1.02
RXRBP28702 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.69□□□□□ -1.02
RXRBP28702 SCARNA5-201ENST00000516201 276 ntBASIC8.69□□□□□ -1.02
RXRBP28702 AC087360.1-201ENST00000518788 616 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms