Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.32□□□□□ -1.56
COL8A2P25067 MIR1910-201ENST00000636955 80 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 AC006213.6-201ENST00000623722 4179 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 AC011455.2-201ENST00000599320 3336 ntBASIC5.32□□□□□ -1.56
COL8A2P25067 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.32□□□□□ -1.56
COL8A2P25067 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
COL8A2P25067 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.32□□□□□ -1.56
COL8A2P25067 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.32□□□□□ -1.56
COL8A2P25067 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL8A2P25067 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.31□□□□□ -1.56
COL8A2P25067 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL8A2P25067 AP000641.1-201ENST00000531988 1639 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 AL133243.2-201ENST00000610331 1621 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 EIF3EP1-201ENST00000433978 1316 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL8A2P25067 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 AC027575.3-201ENST00000583058 2747 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
COL8A2P25067 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
COL8A2P25067 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.31□□□□□ -1.56
COL8A2P25067 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.31□□□□□ -1.56
COL8A2P25067 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A2P25067 RN7SL326P-201ENST00000477493 296 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.31□□□□□ -1.56
COL8A2P25067 RPL34P33-201ENST00000486062 334 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 OR7E99P-201ENST00000505750 922 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.31□□□□□ -1.56
COL8A2P25067 AC010343.2-201ENST00000510162 224 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 RN7SKP35-201ENST00000517210 151 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A2P25067 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A2P25067 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.31□□□□□ -1.56
COL8A2P25067 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A2P25067 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
COL8A2P25067 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.31□□□□□ -1.56
COL8A2P25067 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.31□□□□□ -1.56
COL8A2P25067 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 AC025262.3-201ENST00000623666 360 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.31□□□□□ -1.56
COL8A2P25067 MAPK10-261ENST00000641050 3109 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 BRAFP1-201ENST00000445336 2703 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL8A2P25067 WBP11P1-201ENST00000562560 1931 ntBASIC5.31□□□□□ -1.56
COL8A2P25067 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL8A2P25067 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 AC013488.1-201ENST00000526618 1838 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
COL8A2P25067 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 AC018717.1-201ENST00000457712 1505 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.3□□□□□ -1.56
COL8A2P25067 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL8A2P25067 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL8A2P25067 RNA5SP110-201ENST00000362638 115 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 RNA5SP188-201ENST00000362916 129 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL8A2P25067 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 VN1R3-201ENST00000418822 919 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.3□□□□□ -1.56
COL8A2P25067 PNKDP1-201ENST00000435914 430 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 RPS10P18-201ENST00000442662 495 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.3□□□□□ -1.56
COL8A2P25067 HMGN1P2-201ENST00000445197 310 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 MGAT2P1-201ENST00000449718 797 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 VPS25P1-201ENST00000455691 508 ntBASIC5.3□□□□□ -1.56
COL8A2P25067 AC009963.3-201ENST00000458090 486 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms