Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RPL23AP68-201ENST00000480924 445 ntBASIC6.94□□□□□ -1.3
BDNFP23560 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.94□□□□□ -1.3
BDNFP23560 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.94□□□□□ -1.3
BDNFP23560 AC147055.1-201ENST00000509261 750 ntBASIC6.94□□□□□ -1.3
BDNFP23560 AC093816.1-201ENST00000515076 913 ntBASIC6.94□□□□□ -1.3
BDNFP23560 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.94□□□□□ -1.3
BDNFP23560 AC124891.1-201ENST00000536322 519 ntBASIC6.94□□□□□ -1.3
BDNFP23560 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.94□□□□□ -1.3
BDNFP23560 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.94□□□□□ -1.3
BDNFP23560 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.94□□□□□ -1.3
BDNFP23560 RN7SL208P-201ENST00000577964 296 ntBASIC6.94□□□□□ -1.3
BDNFP23560 AL589765.6-201ENST00000601909 549 ntBASIC6.94□□□□□ -1.3
BDNFP23560 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.94□□□□□ -1.3
BDNFP23560 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.94□□□□□ -1.3
BDNFP23560 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.94□□□□□ -1.3
BDNFP23560 AC012676.3-201ENST00000614983 479 ntBASIC6.94□□□□□ -1.3
BDNFP23560 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.94□□□□□ -1.3
BDNFP23560 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.94□□□□□ -1.3
BDNFP23560 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
BDNFP23560 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
BDNFP23560 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 RLIMP2-201ENST00000427891 1563 ntBASIC6.94□□□□□ -1.3
BDNFP23560 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.94□□□□□ -1.3
BDNFP23560 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
BDNFP23560 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.93□□□□□ -1.3
BDNFP23560 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.93□□□□□ -1.3
BDNFP23560 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.93□□□□□ -1.3
BDNFP23560 AP000432.2-201ENST00000624164 2048 ntBASIC6.93□□□□□ -1.3
BDNFP23560 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.93□□□□□ -1.3
BDNFP23560 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
BDNFP23560 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 RN7SKP171-201ENST00000364417 303 ntBASIC6.93□□□□□ -1.3
BDNFP23560 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
BDNFP23560 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.93□□□□□ -1.3
BDNFP23560 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.93□□□□□ -1.3
BDNFP23560 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.93□□□□□ -1.3
BDNFP23560 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.93□□□□□ -1.3
BDNFP23560 RARRES2P3-201ENST00000457739 473 ntBASIC6.93□□□□□ -1.3
BDNFP23560 AC236972.4-201ENST00000458091 963 ntBASIC6.93□□□□□ -1.3
BDNFP23560 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.93□□□□□ -1.3
BDNFP23560 AC022415.1-202ENST00000486612 523 ntBASIC6.93□□□□□ -1.3
BDNFP23560 AC063943.2-201ENST00000495697 534 ntBASIC6.93□□□□□ -1.3
BDNFP23560 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
BDNFP23560 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.93□□□□□ -1.3
BDNFP23560 RN7SKP183-201ENST00000517169 324 ntBASIC6.93□□□□□ -1.3
BDNFP23560 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.93□□□□□ -1.3
BDNFP23560 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.93□□□□□ -1.3
BDNFP23560 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.93□□□□□ -1.3
BDNFP23560 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.93□□□□□ -1.3
BDNFP23560 AL358913.1-201ENST00000554342 121 ntBASIC6.93□□□□□ -1.3
BDNFP23560 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.93□□□□□ -1.3
BDNFP23560 MT1CP-201ENST00000567054 174 ntBASIC6.93□□□□□ -1.3
BDNFP23560 AC004805.3-201ENST00000603178 310 ntBASIC6.93□□□□□ -1.3
BDNFP23560 AC005828.7-201ENST00000607331 556 ntBASIC6.93□□□□□ -1.3
BDNFP23560 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.93□□□□□ -1.3
BDNFP23560 AC117490.2-201ENST00000610042 594 ntBASIC6.93□□□□□ -1.3
BDNFP23560 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.93□□□□□ -1.3
BDNFP23560 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.93□□□□□ -1.3
BDNFP23560 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
BDNFP23560 AC114546.4-201ENST00000624413 369 ntBASIC6.93□□□□□ -1.3
BDNFP23560 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
BDNFP23560 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
BDNFP23560 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
BDNFP23560 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.93□□□□□ -1.3
BDNFP23560 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.93□□□□□ -1.3
BDNFP23560 PPBPP2-201ENST00000513150 1362 ntBASIC6.93□□□□□ -1.3
BDNFP23560 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.93□□□□□ -1.3
BDNFP23560 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.93□□□□□ -1.3
BDNFP23560 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.93□□□□□ -1.3
BDNFP23560 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
BDNFP23560 AC097063.1-201ENST00000426714 1797 ntBASIC6.92□□□□□ -1.3
BDNFP23560 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
BDNFP23560 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BDNFP23560 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BDNFP23560 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BDNFP23560 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BDNFP23560 SMG1P5-202ENST00000529428 4219 ntBASIC6.92□□□□□ -1.3
BDNFP23560 SMG1P2-201ENST00000566127 4221 ntBASIC6.92□□□□□ -1.3
BDNFP23560 AC090181.3-201ENST00000624777 1514 ntBASIC6.92□□□□□ -1.3
BDNFP23560 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms