Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM1P09493 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 KYNUP3-201ENST00000574386 1341 ntBASIC6.88□□□□□ -1.31
TPM1P09493 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.88□□□□□ -1.31
TPM1P09493 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.88□□□□□ -1.31
TPM1P09493 U3.23-201ENST00000391132 200 ntBASIC6.88□□□□□ -1.31
TPM1P09493 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.88□□□□□ -1.31
TPM1P09493 SETP22-201ENST00000412243 957 ntBASIC6.88□□□□□ -1.31
TPM1P09493 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 AC009303.1-201ENST00000426307 352 ntBASIC6.88□□□□□ -1.31
TPM1P09493 OR52S1P-201ENST00000427016 937 ntBASIC6.88□□□□□ -1.31
TPM1P09493 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.88□□□□□ -1.31
TPM1P09493 RPL6P24-201ENST00000445338 864 ntBASIC6.88□□□□□ -1.31
TPM1P09493 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM1P09493 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.88□□□□□ -1.31
TPM1P09493 CCNJP1-201ENST00000450600 1149 ntBASIC6.88□□□□□ -1.31
TPM1P09493 UOX-201ENST00000471089 899 ntBASIC6.88□□□□□ -1.31
TPM1P09493 AC093719.1-201ENST00000480427 441 ntBASIC6.88□□□□□ -1.31
TPM1P09493 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.88□□□□□ -1.31
TPM1P09493 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.88□□□□□ -1.31
TPM1P09493 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM1P09493 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.88□□□□□ -1.31
TPM1P09493 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.88□□□□□ -1.31
TPM1P09493 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM1P09493 VDAC2P2-201ENST00000544463 901 ntBASIC6.88□□□□□ -1.31
TPM1P09493 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.88□□□□□ -1.31
TPM1P09493 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 RNA5SP439-201ENST00000617595 124 ntBASIC6.88□□□□□ -1.31
TPM1P09493 MIR7159-201ENST00000620587 66 ntBASIC6.88□□□□□ -1.31
TPM1P09493 AC007347.2-201ENST00000623044 180 ntBASIC6.88□□□□□ -1.31
TPM1P09493 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM1P09493 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
TPM1P09493 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
TPM1P09493 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
TPM1P09493 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM1P09493 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.88□□□□□ -1.31
TPM1P09493 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TPM1P09493 GTF2IP4-201ENST00000453092 2054 ntBASIC6.88□□□□□ -1.31
TPM1P09493 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM1P09493 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 SAMM50P1-201ENST00000455403 1399 ntBASIC6.87□□□□□ -1.31
TPM1P09493 AC114876.1-201ENST00000490962 1366 ntBASIC6.87□□□□□ -1.31
TPM1P09493 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 RNA5SP382-201ENST00000363355 112 ntBASIC6.87□□□□□ -1.31
TPM1P09493 EEF1GP6-201ENST00000402309 905 ntBASIC6.87□□□□□ -1.31
TPM1P09493 RN7SKP91-201ENST00000410852 288 ntBASIC6.87□□□□□ -1.31
TPM1P09493 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM1P09493 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.87□□□□□ -1.31
TPM1P09493 AC009506.2-201ENST00000420635 840 ntBASIC6.87□□□□□ -1.31
TPM1P09493 RPL5P2-201ENST00000429598 854 ntBASIC6.87□□□□□ -1.31
TPM1P09493 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM1P09493 FECHP1-201ENST00000431896 1214 ntBASIC6.87□□□□□ -1.31
TPM1P09493 AL353803.3-201ENST00000444641 335 ntBASIC6.87□□□□□ -1.31
TPM1P09493 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM1P09493 AL035690.1-201ENST00000490892 383 ntBASIC6.87□□□□□ -1.31
TPM1P09493 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
TPM1P09493 ENPP7P3-201ENST00000509123 241 ntBASIC6.87□□□□□ -1.31
TPM1P09493 RPA2P3-201ENST00000533268 770 ntBASIC6.87□□□□□ -1.31
TPM1P09493 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.87□□□□□ -1.31
TPM1P09493 AC023968.1-201ENST00000560719 475 ntBASIC6.87□□□□□ -1.31
TPM1P09493 AC092718.4-201ENST00000566639 716 ntBASIC6.87□□□□□ -1.31
TPM1P09493 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM1P09493 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.87□□□□□ -1.31
TPM1P09493 AC025857.2-201ENST00000602711 238 ntBASIC6.87□□□□□ -1.31
TPM1P09493 AC027334.1-201ENST00000603257 310 ntBASIC6.87□□□□□ -1.31
TPM1P09493 AC012175.1-201ENST00000603755 531 ntBASIC6.87□□□□□ -1.31
TPM1P09493 AC018690.1-201ENST00000608144 626 ntBASIC6.87□□□□□ -1.31
TPM1P09493 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.87□□□□□ -1.31
TPM1P09493 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
TPM1P09493 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 AC087516.1-201ENST00000561236 2428 ntBASIC6.87□□□□□ -1.31
TPM1P09493 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
TPM1P09493 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
TPM1P09493 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TPM1P09493 CAP1P2-201ENST00000417455 1409 ntBASIC6.86□□□□□ -1.31
TPM1P09493 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TPM1P09493 SNORD1C-201ENST00000363315 78 ntBASIC6.86□□□□□ -1.31
TPM1P09493 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM1P09493 U3.52-201ENST00000384034 216 ntBASIC6.86□□□□□ -1.31
TPM1P09493 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
TPM1P09493 RN7SKP281-201ENST00000410472 352 ntBASIC6.86□□□□□ -1.31
TPM1P09493 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TPM1P09493 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM1P09493 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.86□□□□□ -1.31
TPM1P09493 AC083855.1-201ENST00000440041 258 ntBASIC6.86□□□□□ -1.31
TPM1P09493 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.86□□□□□ -1.31
TPM1P09493 AC239800.1-201ENST00000442049 719 ntBASIC6.86□□□□□ -1.31
TPM1P09493 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms