Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SNX18P26-201ENST00000458433 740 ntBASIC6.14□□□□□ -1.43
TNFP01375 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.14□□□□□ -1.43
TNFP01375 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.14□□□□□ -1.43
TNFP01375 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.14□□□□□ -1.43
TNFP01375 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.14□□□□□ -1.43
TNFP01375 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.14□□□□□ -1.43
TNFP01375 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 PRMT5P1-201ENST00000514351 598 ntBASIC6.14□□□□□ -1.43
TNFP01375 Y_RNA.710-201ENST00000516975 110 ntBASIC6.14□□□□□ -1.43
TNFP01375 IGHV1-14-201ENST00000523391 241 ntBASIC6.14□□□□□ -1.43
TNFP01375 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.14□□□□□ -1.43
TNFP01375 AC027369.2-201ENST00000528030 440 ntBASIC6.14□□□□□ -1.43
TNFP01375 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.14□□□□□ -1.43
TNFP01375 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.14□□□□□ -1.43
TNFP01375 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.14□□□□□ -1.43
TNFP01375 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.14□□□□□ -1.43
TNFP01375 CYCSP38-201ENST00000559840 322 ntBASIC6.14□□□□□ -1.43
TNFP01375 AC015982.1-201ENST00000608113 465 ntBASIC6.14□□□□□ -1.43
TNFP01375 AC006924.1-201ENST00000610750 559 ntBASIC6.14□□□□□ -1.43
TNFP01375 AP001962.1-201ENST00000624114 559 ntBASIC6.14□□□□□ -1.43
TNFP01375 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TNFP01375 BRD7P1-201ENST00000557705 1915 ntBASIC6.14□□□□□ -1.43
TNFP01375 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 EIF3EP1-201ENST00000433978 1316 ntBASIC6.14□□□□□ -1.43
TNFP01375 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
TNFP01375 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TNFP01375 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 PARP4P1-201ENST00000435945 2337 ntBASIC6.14□□□□□ -1.43
TNFP01375 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TNFP01375 AL133243.2-201ENST00000610331 1621 ntBASIC6.14□□□□□ -1.43
TNFP01375 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
TNFP01375 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
TNFP01375 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TNFP01375 ZNF812P-201ENST00000457674 1694 ntBASIC6.14□□□□□ -1.43
TNFP01375 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
TNFP01375 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
TNFP01375 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 AC092111.1-201ENST00000618256 3358 ntBASIC6.13□□□□□ -1.43
TNFP01375 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 DOCK11P1-201ENST00000553480 5932 ntBASIC6.13□□□□□ -1.43
TNFP01375 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 RNA5SP110-201ENST00000362638 115 ntBASIC6.13□□□□□ -1.43
TNFP01375 RNU1-134P-201ENST00000362935 165 ntBASIC6.13□□□□□ -1.43
TNFP01375 RN7SKP15-201ENST00000364742 309 ntBASIC6.13□□□□□ -1.43
TNFP01375 LCN1P2-201ENST00000372030 223 ntBASIC6.13□□□□□ -1.43
TNFP01375 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.13□□□□□ -1.43
TNFP01375 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.13□□□□□ -1.43
TNFP01375 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 AL353662.1-201ENST00000439099 327 ntBASIC6.13□□□□□ -1.43
TNFP01375 AC002553.3-201ENST00000453002 341 ntBASIC6.13□□□□□ -1.43
TNFP01375 AL358876.1-201ENST00000453364 1075 ntBASIC6.13□□□□□ -1.43
TNFP01375 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.13□□□□□ -1.43
TNFP01375 AC026254.2-201ENST00000475295 371 ntBASIC6.13□□□□□ -1.43
TNFP01375 LDHAP1-201ENST00000509421 992 ntBASIC6.13□□□□□ -1.43
TNFP01375 AC090568.1-201ENST00000509499 856 ntBASIC6.13□□□□□ -1.43
TNFP01375 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.13□□□□□ -1.43
TNFP01375 AP001858.2-201ENST00000536213 601 ntBASIC6.13□□□□□ -1.43
TNFP01375 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.13□□□□□ -1.43
TNFP01375 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
TNFP01375 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.13□□□□□ -1.43
TNFP01375 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.13□□□□□ -1.43
TNFP01375 AC067773.1-201ENST00000603284 1094 ntBASIC6.13□□□□□ -1.43
TNFP01375 AC073333.2-201ENST00000603589 769 ntBASIC6.13□□□□□ -1.43
TNFP01375 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.13□□□□□ -1.43
TNFP01375 AL365181.4-201ENST00000609800 547 ntBASIC6.13□□□□□ -1.43
TNFP01375 AC022106.1-201ENST00000612834 766 ntBASIC6.13□□□□□ -1.43
TNFP01375 AC004801.6-201ENST00000616571 978 ntBASIC6.13□□□□□ -1.43
TNFP01375 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.13□□□□□ -1.43
TNFP01375 TNPO1P2-201ENST00000426249 2665 ntBASIC6.13□□□□□ -1.43
TNFP01375 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.13□□□□□ -1.43
TNFP01375 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.13□□□□□ -1.43
TNFP01375 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
TNFP01375 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TNFP01375 AC104162.1-201ENST00000430831 2382 ntBASIC6.13□□□□□ -1.43
TNFP01375 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TNFP01375 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TNFP01375 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TNFP01375 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms