Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CASC19-255ENST00000641733 1385 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 Y_RNA.62-201ENST00000362840 99 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC007064.3-201ENST00000422608 359 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 RPL7AP14-201ENST00000424041 802 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 OSTCP4-201ENST00000424397 449 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 Z68868.1-201ENST00000429048 544 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 BZW1P1-201ENST00000454901 1240 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 PFN1P8-201ENST00000497012 543 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC091874.2-201ENST00000505889 720 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AL133399.1-201ENST00000527476 298 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC090079.2-201ENST00000575289 768 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 MIR6811-201ENST00000620409 58 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AP001264.1-201ENST00000620602 703 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 AL033543.1-201ENST00000623440 13454 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.5□□□□□ -1.37
TBC1D3FA6NER0 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 RNU1-24P-201ENST00000364285 165 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 RNA5SP431-201ENST00000410312 120 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC096537.2-201ENST00000413707 714 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC115283.1-201ENST00000427353 400 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 NPM1P25-201ENST00000429734 854 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 POU5F1P5-201ENST00000445059 658 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC090589.1-201ENST00000473109 362 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC022415.1-202ENST00000486612 523 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 RN7SL561P-201ENST00000488553 281 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC022206.1-201ENST00000495947 347 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC005363.1-201ENST00000530779 351 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC006518.1-201ENST00000541449 943 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC006512.2-201ENST00000543250 486 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 BUB1P1-201ENST00000603541 607 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC013731.1-201ENST00000604340 883 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AC022726.2-201ENST00000634673 547 ntBASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TBC1D3FA6NER0 IFIT1P1-201ENST00000400497 1449 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms