Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 CASP1P2-201ENST00000526830 1258 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC084851.2-201ENST00000530377 364 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 SYPL1P2-201ENST00000582878 727 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 AC004805.3-201ENST00000603178 310 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 MIR6849-201ENST00000618543 69 ntBASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DRB4X5D2U9 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL391419.1-201ENST00000398901 1275 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 RPL23AP17-201ENST00000401064 499 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 RPL12P23-201ENST00000405880 490 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL139184.1-202ENST00000422303 222 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL645939.3-201ENST00000435408 225 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL020997.1-201ENST00000446554 349 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL034369.1-201ENST00000453808 477 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 snoU13.29-201ENST00000459370 104 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC022206.1-201ENST00000495947 347 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 RPL3P13-201ENST00000550415 216 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 NPM1P5-201ENST00000557228 838 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC026956.1-201ENST00000558741 396 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AP001267.4-201ENST00000602598 545 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC019257.2-201ENST00000605539 497 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 MIR6085-201ENST00000618314 110 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC068213.1-201ENST00000625124 226 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC135068.11-201ENST00000636378 921 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC027575.3-201ENST00000583058 2747 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 AC105235.1-201ENST00000623208 1816 ntBASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DRB4X5D2U9 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 AC093671.1-201ENST00000624981 2929 ntBASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DRB4X5D2U9 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms