Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 LINC00556-201ENST00000569603 412 ntBASIC6.6□□□□□ -1.35
YIPF1Q9Y548 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 AC079791.1-201ENST00000605356 973 ntBASIC6.6□□□□□ -1.35
YIPF1Q9Y548 AL139041.1-201ENST00000605480 610 ntBASIC6.6□□□□□ -1.35
YIPF1Q9Y548 AC022106.1-201ENST00000612834 766 ntBASIC6.6□□□□□ -1.35
YIPF1Q9Y548 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.6□□□□□ -1.35
YIPF1Q9Y548 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
YIPF1Q9Y548 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC089998.1-201ENST00000548575 3141 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 IPPKP1-201ENST00000422501 768 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 NAP1L4P2-201ENST00000425958 899 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 VN1R38P-201ENST00000450265 887 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC002553.3-201ENST00000453002 341 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 RN7SKP238-201ENST00000516483 249 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 RNA5SP340-201ENST00000517132 107 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 OR7E158P-201ENST00000524483 910 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC084337.1-201ENST00000524809 686 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 NANOGNBP2-201ENST00000544753 553 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AL121579.2-201ENST00000555466 590 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC009120.3-201ENST00000563335 499 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC068768.2-201ENST00000602352 343 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AP002345.2-201ENST00000609961 904 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AC130448.2-201ENST00000624082 374 ntBASIC6.59□□□□□ -1.35
YIPF1Q9Y548 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YIPF1Q9Y548 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
YIPF1Q9Y548 FO082842.1-201ENST00000423552 1370 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 NR1H5P-201ENST00000452683 1377 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 AC007406.5-201ENST00000570140 3170 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 SNORA21-201ENST00000362423 132 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 RNU1-49P-201ENST00000363468 159 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 MIR323B-201ENST00000385269 82 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 AC092642.1-201ENST00000392417 425 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 PPIAP10-201ENST00000438675 458 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 ATP5LP2-201ENST00000440646 311 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 MORF4-201ENST00000447135 971 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 HLA-DPA3-207ENST00000454398 229 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.58□□□□□ -1.36
YIPF1Q9Y548 MTCO3P42-201ENST00000509488 518 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 AC090958.1-201ENST00000511122 351 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 CR383658.1-201ENST00000514609 734 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 MTCO3P39-201ENST00000514812 518 ntBASIC6.58□□□□□ -1.36
YIPF1Q9Y548 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms