Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC135721.2-201ENST00000464237 300 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 RPS14P8-201ENST00000478778 369 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC131233.1-201ENST00000479200 955 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 LARP7P4-201ENST00000481075 878 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 UGT2A3P7-201ENST00000510485 734 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 RN7SKP196-201ENST00000516267 345 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 HMGB1P46-201ENST00000520062 610 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC006518.1-201ENST00000541449 943 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AL590032.1-201ENST00000604920 252 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC004775.1-201ENST00000607389 753 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC026951.2-201ENST00000613847 241 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC183089.2-201ENST00000637931 916 ntBASIC6.27□□□□□ -1.41
LRFN1Q9P244 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.27□□□□□ -1.41
LRFN1Q9P244 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRFN1Q9P244 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 ZNF806-201ENST00000438300 1774 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC132825.1-201ENST00000463573 2247 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 RNA5SP308-201ENST00000362532 115 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 RNA5SP474-201ENST00000391234 90 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 UBBP1-201ENST00000392399 473 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 FDPSP5-201ENST00000399474 1057 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 GSTA12P-201ENST00000402398 508 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 CYCSP17-201ENST00000407870 315 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 PTP4A1P1-201ENST00000420539 515 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 CYP4F32P-201ENST00000426492 504 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 VN1R53P-201ENST00000429536 957 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 GAPDHP19-201ENST00000431768 1005 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC245047.1-201ENST00000433276 873 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 AL513321.1-201ENST00000441175 761 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 RN7SL168P-201ENST00000463821 279 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 RN7SL187P-201ENST00000495587 303 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 SUMO2P4-201ENST00000504193 276 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 MTCO1P31-201ENST00000506355 492 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC103833.1-201ENST00000517442 172 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 OR4A46P-201ENST00000527255 933 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 SNRPCP6-201ENST00000528310 210 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC092451.2-201ENST00000538746 658 ntBASIC6.26□□□□□ -1.41
LRFN1Q9P244 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.26□□□□□ -1.41
LRFN1Q9P244 ULK4P1-202ENST00000565174 503 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms