Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC107081.3-201ENST00000612715 2034 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 SORD-203ENST00000558580 1395 ntTSL 5 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC018992.1-201ENST00000523778 2149 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC217777.1-201ENST00000570034 1471 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 SLC16A1P1-201ENST00000486743 1510 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 FHL1-229ENST00000629039 1501 ntTSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC073544.1-201ENST00000600110 1595 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 HYDIN2-203ENST00000614586 13885 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 RNU1-85P-201ENST00000364127 164 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 Y_RNA.372-201ENST00000365599 102 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 Y_RNA.573-201ENST00000384763 105 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 SNORD115-47-201ENST00000391226 86 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 PDCL3P6-201ENST00000429744 706 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 IGFL2-202ENST00000434646 885 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 CLUHP1-201ENST00000435012 1190 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 BSN-AS1-201ENST00000442384 461 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AL845321.1-201ENST00000444603 348 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 SMIM10L2B-AS1-201ENST00000453528 1027 ntTSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 OFD1P4Y-201ENST00000455273 1179 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC097066.1-201ENST00000456878 683 ntTSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC093627.5-201ENST00000462565 662 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 KRT19P6-201ENST00000510983 209 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC010493.1-201ENST00000513479 292 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 WBP1LP10-201ENST00000519787 364 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AP000790.1-201ENST00000528891 737 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AP003170.1-201ENST00000536944 1030 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AP001880.1-201ENST00000538772 421 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AP003721.3-201ENST00000543275 405 ntTSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC090502.1-203ENST00000551726 554 ntTSL 4 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 CMTM3-209ENST00000565003 643 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 MIR544B-201ENST00000582372 78 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 ZNF585B-207ENST00000586320 403 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC010615.2-206ENST00000593653 556 ntTSL 3 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 IGFL1P2-201ENST00000593820 330 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC073254.1-210ENST00000597495 635 ntTSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 PSMA6P4-201ENST00000603247 718 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC091393.1-201ENST00000605088 598 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC005618.1-202ENST00000606674 544 ntTSL 4 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC108673.3-201ENST00000609183 335 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AC136475.10-201ENST00000620253 385 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AP003500.1-201ENST00000626400 527 ntTSL 4 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 AL157786.1-207ENST00000627771 695 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 PCAT14-203ENST00000629869 976 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 ABCC9-207ENST00000636888 1023 ntTSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 CD160-202ENST00000369288 1424 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 IL6-204ENST00000404625 1527 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 BIN2P1-201ENST00000504996 1530 ntBASIC10.23□□□□□ -0.77
RTN4Q9NQC3 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC10.23□□□□□ -0.77
RTN4Q9NQC3 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC10.22□□□□□ -0.77
RTN4Q9NQC3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTN4Q9NQC3 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC10.22□□□□□ -0.77
RTN4Q9NQC3 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC10.22□□□□□ -0.77
RTN4Q9NQC3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTN4Q9NQC3 ANO4-207ENST00000550015 2293 ntTSL 2 BASIC10.22□□□□□ -0.77
RTN4Q9NQC3 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RTN4Q9NQC3 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC10.22□□□□□ -0.77
RTN4Q9NQC3 AC009044.1-201ENST00000624577 1798 ntBASIC10.22□□□□□ -0.77
RTN4Q9NQC3 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms