Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 RN7SKP206-201ENST00000410823 293 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 BX323845.3-201ENST00000428215 527 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 HMGN1P36-201ENST00000446623 298 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AP006222.1-205ENST00000450734 457 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 OR4A40P-201ENST00000533878 948 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AL356801.1-201ENST00000559320 294 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 OR4H6P-201ENST00000563771 921 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 MIR4776-2-201ENST00000580204 80 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AC005244.1-201ENST00000582566 339 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AC011445.2-201ENST00000599274 173 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AC009237.12-201ENST00000604755 742 ntBASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
FYCO1Q9BQS8 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC9.52□□□□□ -0.88
FYCO1Q9BQS8 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.88
FYCO1Q9BQS8 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.52□□□□□ -0.88
FYCO1Q9BQS8 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 CCNB1IP1P1-201ENST00000428976 839 ntBASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 ACA64.1-201ENST00000459171 127 ntBASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AL122020.1-201ENST00000472287 459 ntBASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AC114728.1-201ENST00000488289 483 ntBASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
FYCO1Q9BQS8 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AC015689.2-201ENST00000528172 1738 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 TNPO1P2-201ENST00000426249 2665 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 MAPK10-371ENST00000641952 5209 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 Z93929.1-201ENST00000418200 1475 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 RNA5SP333-201ENST00000363466 118 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 RNA5SP334-201ENST00000364825 118 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 OR7E101P-201ENST00000400428 513 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AC093155.2-201ENST00000420734 937 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AC127526.2-201ENST00000426436 775 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 SUMO2P3-201ENST00000438311 288 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AL022237.1-201ENST00000446663 358 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AC023245.1-201ENST00000468501 517 ntBASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
FYCO1Q9BQS8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC9.5□□□□□ -0.89
FYCO1Q9BQS8 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC9.5□□□□□ -0.89
FYCO1Q9BQS8 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
FYCO1Q9BQS8 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
FYCO1Q9BQS8 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
FYCO1Q9BQS8 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC9.5□□□□□ -0.89
FYCO1Q9BQS8 AL359091.1-201ENST00000449048 1734 ntBASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms