Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC4.43□□□□□ -1.7
LITAFQ99732 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 AC025470.1-201ENST00000510053 2032 ntBASIC4.43□□□□□ -1.7
LITAFQ99732 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LITAFQ99732 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.43□□□□□ -1.7
LITAFQ99732 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC4.42□□□□□ -1.7
LITAFQ99732 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.42□□□□□ -1.7
LITAFQ99732 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LITAFQ99732 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.42□□□□□ -1.7
LITAFQ99732 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC4.42□□□□□ -1.7
LITAFQ99732 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LITAFQ99732 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LITAFQ99732 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC4.42□□□□□ -1.7
LITAFQ99732 RNA5SP350-201ENST00000363298 111 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 RNU5E-10P-201ENST00000363506 118 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LITAFQ99732 SMARCE1P6-201ENST00000398372 1216 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AL121835.1-201ENST00000404250 354 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
LITAFQ99732 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.42□□□□□ -1.7
LITAFQ99732 BX664727.1-201ENST00000416024 466 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 CHCHD3P1-201ENST00000425516 676 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 AL645936.2-201ENST00000430565 928 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC4.42□□□□□ -1.7
LITAFQ99732 ELOCP11-201ENST00000436690 332 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC4.42□□□□□ -1.7
LITAFQ99732 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.42□□□□□ -1.7
LITAFQ99732 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.42□□□□□ -1.7
LITAFQ99732 ELOCP16-201ENST00000444494 332 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 RPL21P33-201ENST00000444831 484 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AL022237.1-201ENST00000446663 358 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 RAB28P3-201ENST00000448325 597 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.42□□□□□ -1.7
LITAFQ99732 AC103563.5-201ENST00000455643 364 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 MTCO2P6-201ENST00000463134 685 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 RPL23AP64-201ENST00000469465 435 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC020898.1-201ENST00000474167 787 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 SETP6-201ENST00000479329 568 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 LARP7P4-201ENST00000481075 878 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 RPL23AP80-201ENST00000495605 424 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC090058.1-201ENST00000498788 435 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.42□□□□□ -1.7
LITAFQ99732 BOLA3P3-201ENST00000505182 232 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC093720.1-201ENST00000505681 714 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC4.42□□□□□ -1.7
LITAFQ99732 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 RN7SKP287-201ENST00000516546 266 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 SNORA70.23-201ENST00000517218 151 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 AC009927.2-201ENST00000520812 481 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.42□□□□□ -1.7
LITAFQ99732 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC4.42□□□□□ -1.7
LITAFQ99732 AC004923.2-201ENST00000529649 369 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 PHBP2-201ENST00000532859 806 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC087894.1-201ENST00000538359 518 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LITAFQ99732 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 AC090971.3-201ENST00000557871 1041 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC090888.2-201ENST00000559765 1144 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 OR4H6P-201ENST00000563771 921 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.42□□□□□ -1.7
LITAFQ99732 AC233702.7-202ENST00000582941 211 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 EIF1P5-201ENST00000585002 234 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 SIGLEC31P-201ENST00000594237 551 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.42□□□□□ -1.7
LITAFQ99732 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC4.42□□□□□ -1.7
LITAFQ99732 AC073333.2-201ENST00000603589 769 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
LITAFQ99732 AC093424.1-201ENST00000604999 338 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC004908.1-201ENST00000606572 541 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC4.42□□□□□ -1.7
LITAFQ99732 RNU6-1192P-201ENST00000612197 107 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 AC004241.2-201ENST00000614562 444 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 CYCSP41-201ENST00000616920 296 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 RNU6-489P-201ENST00000618289 107 ntBASIC4.42□□□□□ -1.7
LITAFQ99732 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms