Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CHMP4CQ96CF2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 RNU6-386P-201ENST00000362650 107 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 RNU1-46P-201ENST00000384425 164 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 SNORD94-201ENST00000386037 137 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 Z68868.1-201ENST00000429048 544 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 NPM1P23-201ENST00000440193 849 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC245291.3-201ENST00000443400 292 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 GAPDHP20-201ENST00000444107 1007 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC022415.1-202ENST00000486612 523 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC026688.1-201ENST00000520639 1168 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AP001000.1-201ENST00000526843 742 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC005519.1-201ENST00000554490 601 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 RPL21P136-201ENST00000605378 396 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AC104307.1-201ENST00000616142 196 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AL731556.1-201ENST00000394628 3711 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AL139384.2-201ENST00000613809 3590 ntBASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CHMP4CQ96CF2 AP004289.1-201ENST00000436307 2205 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 CDY5P-201ENST00000411487 1580 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 CDY9P-201ENST00000451397 1580 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AL033543.1-201ENST00000623440 13454 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 RN7SKP171-201ENST00000364417 303 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC026310.1-201ENST00000396004 378 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AL050335.1-201ENST00000396909 869 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 RN7SKP146-201ENST00000410242 334 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 VN1R53P-201ENST00000429536 957 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC005165.2-201ENST00000466070 380 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC099340.1-201ENST00000475247 599 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 RN7SL741P-201ENST00000482473 289 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 ANP32BP1-202ENST00000568553 737 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC011921.2-201ENST00000589465 152 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 PCA3_2.1-201ENST00000612507 409 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC068213.1-201ENST00000625124 226 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC073488.9-201ENST00000631601 754 ntBASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.84□□□□□ -1.15
CHMP4CQ96CF2 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms