Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC027575.3-201ENST00000583058 2747 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 RNA5SP321-201ENST00000362722 111 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 RN7SKP130-201ENST00000364924 301 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 RNU1-56P-201ENST00000391303 164 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 RPL5P20-201ENST00000403848 896 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 U3.43-201ENST00000410734 213 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 RN7SKP30-201ENST00000411373 334 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 HMGA1P8-201ENST00000414130 321 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AL359092.1-201ENST00000417156 265 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 SETP9-201ENST00000423837 832 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 GAPDHP20-201ENST00000444107 1007 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 MTND6P5-201ENST00000448266 512 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 SEPT7P6-201ENST00000469999 1143 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC022206.1-201ENST00000495947 347 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 IGKV2-19-201ENST00000518132 283 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 VDAC2P2-201ENST00000544463 901 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 HNRNPCP1-201ENST00000556181 766 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC123769.1-201ENST00000530992 3192 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC007342.9-201ENST00000623877 1385 ntBASIC6.17□□□□□ -1.42
VPS33AQ96AX1 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
VPS33AQ96AX1 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC140479.2-201ENST00000421567 3130 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 RNA5SP152-201ENST00000365184 110 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 MIR187-201ENST00000385062 109 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AL929472.1-201ENST00000417484 429 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 MRPS21P5-201ENST00000417885 231 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 RFESDP1-201ENST00000422350 461 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 OR52S1P-201ENST00000427016 937 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC003989.1-201ENST00000434569 565 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC019185.3-201ENST00000438805 323 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 RN7SL37P-201ENST00000490461 307 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 RPL10P7-201ENST00000495649 625 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 RNA5SP318-201ENST00000516352 92 ntBASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.16□□□□□ -1.42
VPS33AQ96AX1 QTRT1P1-201ENST00000604344 1078 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms