Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 LINC01616-201ENST00000561816 2280 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 AL355377.1-201ENST00000621125 1653 ntBASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRAF3IP1Q8TDR0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC067942.1-201ENST00000488045 1493 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 OFD1P17-201ENST00000437639 3018 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 SNORD35A-201ENST00000363389 86 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 RN7SKP237-201ENST00000364663 301 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 RNU1-84P-201ENST00000365447 164 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 MRPS21P5-201ENST00000417885 231 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 CYP4F30P-202ENST00000420048 405 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 MED28P4-201ENST00000433137 572 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC092967.1-201ENST00000449016 481 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 VPS25P1-201ENST00000455691 508 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 GTF2IP11-201ENST00000526931 420 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC084851.2-201ENST00000530377 364 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AL583832.1-201ENST00000603227 784 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AL390877.1-201ENST00000605704 214 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AL357153.4-201ENST00000620487 1016 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC068213.1-201ENST00000625124 226 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AC135068.11-201ENST00000636378 921 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 TMCC1P1-201ENST00000518897 1980 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 AL353743.3-201ENST00000442109 1468 ntBASIC6.6□□□□□ -1.35
TRAF3IP1Q8TDR0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 NPM1P38-201ENST00000403835 865 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 AC083862.1-201ENST00000427378 1242 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 BMP6P1-201ENST00000431230 679 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 AL034369.1-201ENST00000453808 477 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 AC063955.1-201ENST00000462872 685 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 OR9A1P-202ENST00000484361 945 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 RN7SL714P-201ENST00000487050 298 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 MTCO1P55-201ENST00000489829 745 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 RNA5SP400-201ENST00000517155 111 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 TPRX1P1-201ENST00000557620 319 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 AL589743.6-201ENST00000611025 117 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 AL445649.1-201ENST00000615941 691 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 SHQ1P1-201ENST00000437111 1544 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 CCAT2-201ENST00000630920 1752 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 OR4G1P-202ENST00000641173 1788 ntBASIC6.59□□□□□ -1.35
TRAF3IP1Q8TDR0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.36
TRAF3IP1Q8TDR0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRAF3IP1Q8TDR0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRAF3IP1Q8TDR0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRAF3IP1Q8TDR0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TRAF3IP1Q8TDR0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAF3IP1Q8TDR0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAF3IP1Q8TDR0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
TRAF3IP1Q8TDR0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
TRAF3IP1Q8TDR0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAF3IP1Q8TDR0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TRAF3IP1Q8TDR0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms