Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 AC007956.1-201ENST00000555623 542 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 RPA2P1-201ENST00000556557 721 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 AC090236.2-201ENST00000587933 1101 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AC092646.2-201ENST00000431242 2095 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 RNU105B-201ENST00000364478 208 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AL096800.1-201ENST00000405326 893 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AL096829.1-201ENST00000413677 457 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 KIF4CP-201ENST00000422742 1279 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AC027369.2-201ENST00000528030 440 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AC119403.2-201ENST00000590960 598 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AC067773.1-201ENST00000603284 1094 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AP001885.1-201ENST00000621658 558 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 CCNT2P1-201ENST00000423082 1315 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
VPS8Q8N3P4 AL359976.1-201ENST00000418655 3528 ntBASIC9.6□□□□□ -0.87
VPS8Q8N3P4 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 SUGT1P2-201ENST00000379452 992 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 PTCD2P2-201ENST00000415579 1095 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 BX284632.2-201ENST00000421091 399 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 AL512605.1-202ENST00000441919 381 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 AL359955.2-201ENST00000445380 353 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 RN7SL193P-201ENST00000491708 276 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 Y_RNA.667-201ENST00000516212 107 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 AC244502.2-201ENST00000543361 851 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 AC129915.3-201ENST00000634128 948 ntBASIC9.59□□□□□ -0.87
VPS8Q8N3P4 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
VPS8Q8N3P4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 RPS14P4-201ENST00000415880 418 ntBASIC9.58□□□□□ -0.88
VPS8Q8N3P4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 GNL2P1-201ENST00000451274 2190 ntBASIC9.58□□□□□ -0.88
VPS8Q8N3P4 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 AL035690.1-201ENST00000490892 383 ntBASIC9.58□□□□□ -0.88
VPS8Q8N3P4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 OLR1-210ENST00000544577 924 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 AC027334.1-201ENST00000603257 310 ntBASIC9.58□□□□□ -0.88
VPS8Q8N3P4 AC104581.5-201ENST00000624171 7141 ntBASIC9.58□□□□□ -0.88
VPS8Q8N3P4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 CAST-202ENST00000325674 3356 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS8Q8N3P4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AP003486.1-201ENST00000525716 3994 ntBASIC9.57□□□□□ -0.88
VPS8Q8N3P4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 NMD3P2-201ENST00000421815 761 ntBASIC9.57□□□□□ -0.88
VPS8Q8N3P4 KCTD9P1-201ENST00000430462 1167 ntBASIC9.57□□□□□ -0.88
VPS8Q8N3P4 RPS29P14-201ENST00000431518 171 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms