Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 RNA5SP321-201ENST00000362722 111 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 RNA5SP140-201ENST00000364524 92 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 RN7SKP186-201ENST00000365371 303 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 CXADRP1-201ENST00000398098 1095 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 RPL12P23-201ENST00000405880 490 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 SNORA11.3-201ENST00000408471 128 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 RN7SKP129-201ENST00000410288 299 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 RN7SKP188-201ENST00000410789 317 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 OR6R1P-201ENST00000431838 940 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 TIMM8BP2-201ENST00000445940 251 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 RPL7AP23-201ENST00000482625 776 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 SUMO2P4-201ENST00000504193 276 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 RNA5SP473-201ENST00000516402 125 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC073581.1-201ENST00000519036 575 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 MIR3154-201ENST00000577829 84 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC125494.2-201ENST00000602431 657 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 WBP1LP12-201ENST00000604449 331 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC111186.1-201ENST00000604684 130 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC004241.2-201ENST00000614562 444 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 CXADRP3-202ENST00000617265 1100 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 SNORA11.6-201ENST00000619030 128 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 MIR6806-201ENST00000622141 64 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC006213.6-201ENST00000623722 4179 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 AC093297.3-201ENST00000607056 2517 ntBASIC4.28□□□□□ -1.72
SCXQ7RTU7 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.28□□□□□ -1.72
SCXQ7RTU7 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SCXQ7RTU7 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 OR7A2P-201ENST00000304105 930 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 SEPT7P2-202ENST00000398921 823 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AL359694.1-201ENST00000403247 604 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AL353626.3-201ENST00000413399 657 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 CDK7P1-201ENST00000434574 693 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC013410.1-201ENST00000436223 1232 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 HMGN1P6-201ENST00000438508 291 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.27□□□□□ -1.73
SCXQ7RTU7 AC118758.1-202ENST00000454719 225 ntBASIC4.27□□□□□ -1.73
SCXQ7RTU7 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms