Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CTR9Q6PD62 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CTR9Q6PD62 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CTR9Q6PD62 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CTR9Q6PD62 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.6□□□□□ -1.19
CTR9Q6PD62 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CTR9Q6PD62 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
CTR9Q6PD62 UGT2B27P-201ENST00000505092 1620 ntBASIC7.6□□□□□ -1.19
CTR9Q6PD62 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTR9Q6PD62 NCOA4P2-201ENST00000340589 1813 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC022034.1-201ENST00000512867 2156 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTR9Q6PD62 OR56A4-201ENST00000330728 1209 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CTR9Q6PD62 RNA5SP188-201ENST00000362916 129 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 SNORA70.9-201ENST00000384370 135 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 RBBP4P5-201ENST00000398583 1266 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC108479.1-201ENST00000431142 427 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 CXCR2P1-202ENST00000443392 1074 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC091965.3-201ENST00000506236 208 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 IGHV4-55-201ENST00000520889 368 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC036111.2-201ENST00000533247 901 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC005332.4-201ENST00000592752 579 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AL031658.2-201ENST00000616850 651 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 MIR6811-201ENST00000620409 58 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 OR7E91P-202ENST00000642062 1198 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AL136984.1-201ENST00000607611 1893 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC125238.2-201ENST00000430003 1440 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 AC013488.1-201ENST00000526618 1838 ntBASIC7.59□□□□□ -1.19
CTR9Q6PD62 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
CTR9Q6PD62 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTR9Q6PD62 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTR9Q6PD62 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CTR9Q6PD62 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTR9Q6PD62 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTR9Q6PD62 CXADRP1-201ENST00000398098 1095 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 AC112492.2-201ENST00000432774 1030 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 HSD3BP3-201ENST00000514706 994 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 AP004607.6-201ENST00000525033 1202 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 BCAS2P1-201ENST00000528022 632 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 RPSAP75-201ENST00000605848 301 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 CXADRP3-202ENST00000617265 1100 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 CASC19-274ENST00000642018 970 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 CDY5P-201ENST00000411487 1580 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 CDY9P-201ENST00000451397 1580 ntBASIC7.58□□□□□ -1.2
CTR9Q6PD62 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTR9Q6PD62 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTR9Q6PD62 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CTR9Q6PD62 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CTR9Q6PD62 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.57□□□□□ -1.2
CTR9Q6PD62 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CTR9Q6PD62 AC009779.8-201ENST00000641684 4384 ntBASIC7.57□□□□□ -1.2
CTR9Q6PD62 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.57□□□□□ -1.2
CTR9Q6PD62 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CTR9Q6PD62 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CTR9Q6PD62 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms