Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AC140479.2-201ENST00000421567 3130 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 RNA5SP321-201ENST00000362722 111 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 SNORA5.1-201ENST00000384275 131 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 RNA5SP176-201ENST00000390956 110 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AL391419.1-201ENST00000398901 1275 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 FDPSP5-201ENST00000399474 1057 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 SSR1P1-201ENST00000407630 814 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AL590399.4-201ENST00000436561 601 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AL162739.1-201ENST00000450606 307 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AL135933.1-201ENST00000498657 802 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 MRPL57P6-201ENST00000506570 309 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AC021820.1-201ENST00000525564 808 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 OR8Q1P-201ENST00000526467 655 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AC011193.2-201ENST00000582638 367 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AL589863.1-201ENST00000595383 631 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 SNORD96A-201ENST00000606577 79 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AC018690.1-201ENST00000608144 626 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AL161931.1-201ENST00000612768 246 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AC097641.3-201ENST00000613523 464 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 pRNA.9-201ENST00000618609 89 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 BX005040.2-201ENST00000620504 370 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 BX284613.1-201ENST00000452221 1641 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 LINC01808-203ENST00000641932 1643 ntBASIC5.8□□□□□ -1.48
LPCAT4Q643R3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
LPCAT4Q643R3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC024587.1-201ENST00000505925 2157 ntBASIC5.79□□□□□ -1.48
LPCAT4Q643R3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 RNA5SP302-201ENST00000364896 100 ntBASIC5.79□□□□□ -1.48
LPCAT4Q643R3 LDHAP5-201ENST00000394996 622 ntBASIC5.79□□□□□ -1.48
LPCAT4Q643R3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AL158827.1-201ENST00000416300 391 ntBASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 RN7SL492P-201ENST00000460700 295 ntBASIC5.79□□□□□ -1.48
LPCAT4Q643R3 RN7SL552P-201ENST00000462094 276 ntBASIC5.79□□□□□ -1.48
LPCAT4Q643R3 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC111000.6-201ENST00000514471 709 ntBASIC5.79□□□□□ -1.48
LPCAT4Q643R3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC010442.1-201ENST00000515583 816 ntBASIC5.79□□□□□ -1.48
LPCAT4Q643R3 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AP001646.2-201ENST00000528645 1156 ntBASIC5.79□□□□□ -1.48
LPCAT4Q643R3 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms