Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC125238.2-201ENST00000430003 1440 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 MIPEPP2-201ENST00000422560 1819 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 PPIAP24-201ENST00000328558 471 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC074375.1-201ENST00000372993 192 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 MRPS6P2-201ENST00000381143 370 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 SNORA70H-201ENST00000383910 135 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 SNORA70J-201ENST00000384182 135 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 MIR138-2-201ENST00000384916 84 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AL391419.1-201ENST00000398901 1275 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC007568.1-201ENST00000422912 471 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AL121578.2-201ENST00000448797 447 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AKR1D1P1-201ENST00000457236 936 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC236972.4-201ENST00000458091 963 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 RPL5P14-201ENST00000494197 878 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC093815.1-201ENST00000508637 280 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AP004607.5-201ENST00000532034 217 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 CHEK2P2-201ENST00000554701 672 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 HNRNPA1P74-201ENST00000560782 835 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC092718.4-201ENST00000566639 716 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 MIR378H-201ENST00000579966 83 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 SYPL1P2-201ENST00000582878 727 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC090774.2-201ENST00000584708 322 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 RPL12P48-201ENST00000605620 304 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 RAB28P4-201ENST00000622233 665 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC073488.9-201ENST00000631601 754 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 AC006511.3-201ENST00000624929 1783 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 SAGE3P-201ENST00000619800 1635 ntBASIC4.24□□□□□ -1.73
SYCNQ0VAF6 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYCNQ0VAF6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 NEK2P2-201ENST00000438441 1338 ntBASIC4.23□□□□□ -1.73
SYCNQ0VAF6 EEF1A1P12-201ENST00000443590 1346 ntBASIC4.23□□□□□ -1.73
SYCNQ0VAF6 CR383656.5-201ENST00000547616 1340 ntBASIC4.23□□□□□ -1.73
SYCNQ0VAF6 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 SYT14P1-202ENST00000600441 1448 ntBASIC4.23□□□□□ -1.73
SYCNQ0VAF6 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 AL078595.2-201ENST00000605309 1780 ntBASIC4.23□□□□□ -1.73
SYCNQ0VAF6 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 U3.52-201ENST00000384034 216 ntBASIC4.23□□□□□ -1.73
SYCNQ0VAF6 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 SMARCE1P6-201ENST00000398372 1216 ntBASIC4.23□□□□□ -1.73
SYCNQ0VAF6 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.23□□□□□ -1.73
SYCNQ0VAF6 RPS17P17-201ENST00000419392 409 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms