Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
CCNA1P78396 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.26□□□□□ -1.25
CCNA1P78396 CDY17P-201ENST00000414121 1282 ntBASIC7.26□□□□□ -1.25
CCNA1P78396 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.26□□□□□ -1.25
CCNA1P78396 AC023141.3-201ENST00000436698 278 ntBASIC7.26□□□□□ -1.25
CCNA1P78396 RPL31P15-201ENST00000449770 338 ntBASIC7.26□□□□□ -1.25
CCNA1P78396 OR13C1P-201ENST00000457612 963 ntBASIC7.26□□□□□ -1.25
CCNA1P78396 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.26□□□□□ -1.25
CCNA1P78396 RNA5SP340-201ENST00000517132 107 ntBASIC7.26□□□□□ -1.25
CCNA1P78396 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.26□□□□□ -1.25
CCNA1P78396 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.26□□□□□ -1.25
CCNA1P78396 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.26□□□□□ -1.25
CCNA1P78396 AL512652.1-201ENST00000619006 500 ntBASIC7.26□□□□□ -1.25
CCNA1P78396 AC012653.2-201ENST00000621880 420 ntBASIC7.26□□□□□ -1.25
CCNA1P78396 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CCNA1P78396 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
CCNA1P78396 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.26□□□□□ -1.25
CCNA1P78396 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 AL117339.4-201ENST00000608335 7063 ntBASIC7.26□□□□□ -1.25
CCNA1P78396 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 AC018717.1-201ENST00000457712 1505 ntBASIC7.26□□□□□ -1.25
CCNA1P78396 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.26□□□□□ -1.25
CCNA1P78396 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCNA1P78396 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
CCNA1P78396 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.25□□□□□ -1.25
CCNA1P78396 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.25□□□□□ -1.25
CCNA1P78396 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CCNA1P78396 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.25□□□□□ -1.25
CCNA1P78396 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CCNA1P78396 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CCNA1P78396 SNORA51.1-201ENST00000363243 140 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.25□□□□□ -1.25
CCNA1P78396 RN7SKP121-201ENST00000410842 305 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CCNA1P78396 CDY8P-201ENST00000428380 1279 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 OR3D1P-201ENST00000438288 955 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 CDY20P-201ENST00000447528 1279 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 AC002553.3-201ENST00000453002 341 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 AC007998.1-201ENST00000474156 672 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 RN7SL174P-201ENST00000475578 289 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.25□□□□□ -1.25
CCNA1P78396 AC010343.2-201ENST00000510162 224 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 AC090958.1-201ENST00000511122 351 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 AC022826.1-201ENST00000519383 805 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.25□□□□□ -1.25
CCNA1P78396 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.25□□□□□ -1.25
CCNA1P78396 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.25□□□□□ -1.25
CCNA1P78396 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.25□□□□□ -1.25
CCNA1P78396 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.25□□□□□ -1.25
CCNA1P78396 RPA2P1-201ENST00000556557 721 ntBASIC7.25□□□□□ -1.25
CCNA1P78396 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.25□□□□□ -1.25
CCNA1P78396 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.25□□□□□ -1.25
CCNA1P78396 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CCNA1P78396 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.25□□□□□ -1.25
CCNA1P78396 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CCNA1P78396 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCNA1P78396 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CCNA1P78396 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CCNA1P78396 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.24□□□□□ -1.25
CCNA1P78396 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CCNA1P78396 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
CCNA1P78396 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 SNORA21-201ENST00000362423 132 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 RNA5SP110-201ENST00000362638 115 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.24□□□□□ -1.25
CCNA1P78396 SNORA11B-201ENST00000408175 129 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 CHEK2P5-201ENST00000423877 246 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.24□□□□□ -1.25
CCNA1P78396 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.24□□□□□ -1.25
CCNA1P78396 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.24□□□□□ -1.25
CCNA1P78396 RN7SL705P-201ENST00000481678 294 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 OR5H7P-201ENST00000514084 930 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 IGKV1D-22-201ENST00000518953 324 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 IGLV3-6-201ENST00000523937 250 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms