Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL021368.3-201ENST00000607119 578 ntBASIC5.53□□□□□ -1.52
HIST1H3AP68431 SNORA74.4-201ENST00000607595 199 ntBASIC5.53□□□□□ -1.52
HIST1H3AP68431 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.53□□□□□ -1.52
HIST1H3AP68431 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.53□□□□□ -1.52
HIST1H3AP68431 MIR7159-201ENST00000620587 66 ntBASIC5.53□□□□□ -1.52
HIST1H3AP68431 AC135068.11-201ENST00000636378 921 ntBASIC5.53□□□□□ -1.52
HIST1H3AP68431 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HIST1H3AP68431 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HIST1H3AP68431 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.53□□□□□ -1.52
HIST1H3AP68431 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HIST1H3AP68431 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HIST1H3AP68431 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HIST1H3AP68431 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.52
HIST1H3AP68431 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 RN7SKP237-201ENST00000364663 301 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 MIR433-201ENST00000384837 93 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 AL451046.1-201ENST00000406097 534 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 RN7SKP129-201ENST00000410288 299 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 DHFRP2-201ENST00000414224 547 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 GPN3P1-201ENST00000423883 535 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 VPS25P1-201ENST00000455691 508 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 RN7SL393P-201ENST00000463588 296 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 RPL12P31-201ENST00000478433 450 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 RN7SL714P-201ENST00000487050 298 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 RNA5SP418-201ENST00000515951 117 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 OR4A6P-201ENST00000534364 970 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC025283.1-201ENST00000572039 734 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 MIR4732-201ENST00000581873 76 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC024267.2-201ENST00000582737 417 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 OR7A8P-201ENST00000595427 913 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 AL390877.1-201ENST00000605704 214 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC006924.1-201ENST00000610750 559 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 MIR6885-201ENST00000612241 66 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HIST1H3AP68431 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.52□□□□□ -1.53
HIST1H3AP68431 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 AP002512.4-202ENST00000641599 4530 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HIST1H3AP68431 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AL445238.1-204ENST00000400311 463 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 RPS17P17-201ENST00000419392 409 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 AC007562.1-201ENST00000421819 517 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 GAPDHP19-201ENST00000431768 1005 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 GTF2IP14-201ENST00000441415 586 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AL031681.1-201ENST00000443304 400 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 OR2L9P-201ENST00000444456 913 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AC023274.2-201ENST00000445264 521 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 AL022319.1-201ENST00000458183 1167 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.51□□□□□ -1.53
HIST1H3AP68431 RN7SL369P-201ENST00000477138 299 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 RN7SL326P-201ENST00000477493 296 ntBASIC5.51□□□□□ -1.53
HIST1H3AP68431 PPP1R11P1-201ENST00000486095 376 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms