Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.96□□□□□ -1.46
LIM2P55344 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.96□□□□□ -1.46
LIM2P55344 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.96□□□□□ -1.46
LIM2P55344 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
LIM2P55344 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIM2P55344 AC073365.1-203ENST00000641055 1992 ntBASIC5.96□□□□□ -1.46
LIM2P55344 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
LIM2P55344 XKRY2-202ENST00000623874 1581 ntBASIC5.96□□□□□ -1.46
LIM2P55344 XKRY-202ENST00000624960 1581 ntBASIC5.96□□□□□ -1.46
LIM2P55344 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
LIM2P55344 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LIM2P55344 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIM2P55344 OR2AH1P-202ENST00000641232 2744 ntBASIC5.96□□□□□ -1.46
LIM2P55344 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.96□□□□□ -1.46
LIM2P55344 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIM2P55344 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIM2P55344 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LIM2P55344 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.96□□□□□ -1.46
LIM2P55344 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.95□□□□□ -1.46
LIM2P55344 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.95□□□□□ -1.46
LIM2P55344 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LIM2P55344 AC068769.1-201ENST00000474767 2426 ntBASIC5.95□□□□□ -1.46
LIM2P55344 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.95□□□□□ -1.46
LIM2P55344 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 RN7SKP250-201ENST00000363924 321 ntBASIC5.95□□□□□ -1.46
LIM2P55344 AL451046.1-201ENST00000406097 534 ntBASIC5.95□□□□□ -1.46
LIM2P55344 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 THEM7P-201ENST00000419556 672 ntBASIC5.95□□□□□ -1.46
LIM2P55344 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 RPS7P14-201ENST00000426405 583 ntBASIC5.95□□□□□ -1.46
LIM2P55344 BMP6P1-201ENST00000431230 679 ntBASIC5.95□□□□□ -1.46
LIM2P55344 RPSAP32-201ENST00000432681 526 ntBASIC5.95□□□□□ -1.46
LIM2P55344 AC094019.1-201ENST00000434678 472 ntBASIC5.95□□□□□ -1.46
LIM2P55344 AC096632.2-201ENST00000438139 1239 ntBASIC5.95□□□□□ -1.46
LIM2P55344 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 AC007383.1-201ENST00000445875 636 ntBASIC5.95□□□□□ -1.46
LIM2P55344 MORF4-201ENST00000447135 971 ntBASIC5.95□□□□□ -1.46
LIM2P55344 RN7SL326P-201ENST00000477493 296 ntBASIC5.95□□□□□ -1.46
LIM2P55344 OR4D12P-201ENST00000509361 911 ntBASIC5.95□□□□□ -1.46
LIM2P55344 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 AP003033.2-201ENST00000528901 805 ntBASIC5.95□□□□□ -1.46
LIM2P55344 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
LIM2P55344 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LIM2P55344 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.95□□□□□ -1.46
LIM2P55344 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.95□□□□□ -1.46
LIM2P55344 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 AC006924.1-201ENST00000610750 559 ntBASIC5.95□□□□□ -1.46
LIM2P55344 AP003789.1-201ENST00000617737 605 ntBASIC5.95□□□□□ -1.46
LIM2P55344 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.95□□□□□ -1.46
LIM2P55344 AC022726.2-201ENST00000634673 547 ntBASIC5.95□□□□□ -1.46
LIM2P55344 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.95□□□□□ -1.46
LIM2P55344 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.95□□□□□ -1.46
LIM2P55344 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LIM2P55344 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
LIM2P55344 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.95□□□□□ -1.46
LIM2P55344 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LIM2P55344 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.95□□□□□ -1.46
LIM2P55344 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LIM2P55344 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LIM2P55344 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 AC005225.5-201ENST00000623547 2225 ntBASIC5.94□□□□□ -1.46
LIM2P55344 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LIM2P55344 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 OR11H13P-201ENST00000359695 979 ntBASIC5.94□□□□□ -1.46
LIM2P55344 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.94□□□□□ -1.46
LIM2P55344 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.94□□□□□ -1.46
LIM2P55344 LCN1P2-201ENST00000372030 223 ntBASIC5.94□□□□□ -1.46
LIM2P55344 MIR433-201ENST00000384837 93 ntBASIC5.94□□□□□ -1.46
LIM2P55344 AL360271.1-201ENST00000395679 510 ntBASIC5.94□□□□□ -1.46
LIM2P55344 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 RN7SKP121-201ENST00000410842 305 ntBASIC5.94□□□□□ -1.46
LIM2P55344 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.94□□□□□ -1.46
LIM2P55344 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LIM2P55344 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.94□□□□□ -1.46
LIM2P55344 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LIM2P55344 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.94□□□□□ -1.46
LIM2P55344 RPS27P20-201ENST00000492051 246 ntBASIC5.94□□□□□ -1.46
LIM2P55344 RN7SL568P-201ENST00000493069 298 ntBASIC5.94□□□□□ -1.46
LIM2P55344 RN7SL104P-201ENST00000498686 293 ntBASIC5.94□□□□□ -1.46
LIM2P55344 KATNBL1P4-201ENST00000503545 918 ntBASIC5.94□□□□□ -1.46
LIM2P55344 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.94□□□□□ -1.46
LIM2P55344 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms