Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL359704.2-201ENST00000604335 521 ntBASIC6.25□□□□□ -1.41
PDX1P52945 AP002345.2-201ENST00000609961 904 ntBASIC6.25□□□□□ -1.41
PDX1P52945 AL136097.3-201ENST00000611097 505 ntBASIC6.25□□□□□ -1.41
PDX1P52945 AC005277.2-201ENST00000617898 390 ntBASIC6.25□□□□□ -1.41
PDX1P52945 MIR6811-201ENST00000620409 58 ntBASIC6.25□□□□□ -1.41
PDX1P52945 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.25□□□□□ -1.41
PDX1P52945 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.25□□□□□ -1.41
PDX1P52945 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PDX1P52945 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PDX1P52945 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
PDX1P52945 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.25□□□□□ -1.41
PDX1P52945 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.25□□□□□ -1.41
PDX1P52945 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDX1P52945 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDX1P52945 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.24□□□□□ -1.41
PDX1P52945 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.24□□□□□ -1.41
PDX1P52945 AC087392.3-202ENST00000358446 1754 ntBASIC6.24□□□□□ -1.41
PDX1P52945 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PDX1P52945 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.24□□□□□ -1.41
PDX1P52945 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PDX1P52945 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDX1P52945 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDX1P52945 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.24□□□□□ -1.41
PDX1P52945 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.24□□□□□ -1.41
PDX1P52945 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDX1P52945 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
PDX1P52945 AL139805.1-201ENST00000407837 289 ntBASIC6.24□□□□□ -1.41
PDX1P52945 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.24□□□□□ -1.41
PDX1P52945 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.24□□□□□ -1.41
PDX1P52945 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.24□□□□□ -1.41
PDX1P52945 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.24□□□□□ -1.41
PDX1P52945 CXCR2P1-202ENST00000443392 1074 ntBASIC6.24□□□□□ -1.41
PDX1P52945 MTND4LP12-201ENST00000448237 295 ntBASIC6.24□□□□□ -1.41
PDX1P52945 OR52I1-201ENST00000450052 1050 ntBASIC6.24□□□□□ -1.41
PDX1P52945 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.24□□□□□ -1.41
PDX1P52945 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.24□□□□□ -1.41
PDX1P52945 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.24□□□□□ -1.41
PDX1P52945 AC096754.1-201ENST00000508904 818 ntBASIC6.24□□□□□ -1.41
PDX1P52945 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.24□□□□□ -1.41
PDX1P52945 LDHAP1-201ENST00000509421 992 ntBASIC6.24□□□□□ -1.41
PDX1P52945 AC253576.1-201ENST00000511645 1156 ntBASIC6.24□□□□□ -1.41
PDX1P52945 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.24□□□□□ -1.41
PDX1P52945 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.24□□□□□ -1.41
PDX1P52945 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.24□□□□□ -1.41
PDX1P52945 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.24□□□□□ -1.41
PDX1P52945 AC023968.1-201ENST00000560719 475 ntBASIC6.24□□□□□ -1.41
PDX1P52945 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.24□□□□□ -1.41
PDX1P52945 RN7SL208P-201ENST00000577964 296 ntBASIC6.24□□□□□ -1.41
PDX1P52945 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.24□□□□□ -1.41
PDX1P52945 AL138895.2-201ENST00000603019 178 ntBASIC6.24□□□□□ -1.41
PDX1P52945 AP001437.1-201ENST00000608783 456 ntBASIC6.24□□□□□ -1.41
PDX1P52945 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDX1P52945 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.24□□□□□ -1.41
PDX1P52945 AL137918.1-201ENST00000624542 1922 ntBASIC6.24□□□□□ -1.41
PDX1P52945 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDX1P52945 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.24□□□□□ -1.41
PDX1P52945 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
PDX1P52945 PABPC1P8-201ENST00000452851 2086 ntBASIC6.24□□□□□ -1.41
PDX1P52945 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDX1P52945 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDX1P52945 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.24□□□□□ -1.41
PDX1P52945 AC018765.1-201ENST00000623357 3446 ntBASIC6.24□□□□□ -1.41
PDX1P52945 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.23□□□□□ -1.41
PDX1P52945 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.23□□□□□ -1.41
PDX1P52945 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PDX1P52945 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
PDX1P52945 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
PDX1P52945 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 Z93929.1-201ENST00000418200 1475 ntBASIC6.23□□□□□ -1.41
PDX1P52945 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.23□□□□□ -1.41
PDX1P52945 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 RNA5SP435-201ENST00000364044 108 ntBASIC6.23□□□□□ -1.41
PDX1P52945 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.23□□□□□ -1.41
PDX1P52945 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.23□□□□□ -1.41
PDX1P52945 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.23□□□□□ -1.41
PDX1P52945 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.23□□□□□ -1.41
PDX1P52945 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.23□□□□□ -1.41
PDX1P52945 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.23□□□□□ -1.41
PDX1P52945 RN7SKP35-201ENST00000517210 151 ntBASIC6.23□□□□□ -1.41
PDX1P52945 IGKV3D-25-201ENST00000519599 235 ntBASIC6.23□□□□□ -1.41
PDX1P52945 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 470.8 ms