Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.9□□□□□ -1.3
NEK3P51956 AC114876.1-201ENST00000490962 1366 ntBASIC6.9□□□□□ -1.31
NEK3P51956 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.9□□□□□ -1.31
NEK3P51956 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
NEK3P51956 DDX6P1-205ENST00000441966 1436 ntBASIC6.9□□□□□ -1.31
NEK3P51956 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
NEK3P51956 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NEK3P51956 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NEK3P51956 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NEK3P51956 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NEK3P51956 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
NEK3P51956 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.9□□□□□ -1.31
NEK3P51956 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NEK3P51956 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
NEK3P51956 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.89□□□□□ -1.31
NEK3P51956 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.89□□□□□ -1.31
NEK3P51956 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NEK3P51956 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NEK3P51956 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.89□□□□□ -1.31
NEK3P51956 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.89□□□□□ -1.31
NEK3P51956 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.89□□□□□ -1.31
NEK3P51956 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 MTND4LP7-201ENST00000431728 294 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.89□□□□□ -1.31
NEK3P51956 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 RPEP4-201ENST00000437636 602 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC019084.1-201ENST00000457337 432 ntBASIC6.89□□□□□ -1.31
NEK3P51956 MTND6P32-201ENST00000457611 483 ntBASIC6.89□□□□□ -1.31
NEK3P51956 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 AP003385.3-201ENST00000472498 287 ntBASIC6.89□□□□□ -1.31
NEK3P51956 RN7SL561P-201ENST00000488553 281 ntBASIC6.89□□□□□ -1.31
NEK3P51956 SNRPCP11-201ENST00000492453 205 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC015864.1-201ENST00000496512 544 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.89□□□□□ -1.31
NEK3P51956 AC114324.2-202ENST00000503812 134 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 FABP5P6-201ENST00000510588 409 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.89□□□□□ -1.31
NEK3P51956 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.89□□□□□ -1.31
NEK3P51956 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 AC024267.2-201ENST00000582737 417 ntBASIC6.89□□□□□ -1.31
NEK3P51956 ADAD1P2-201ENST00000588476 646 ntBASIC6.89□□□□□ -1.31
NEK3P51956 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 AL359704.2-201ENST00000604335 521 ntBASIC6.89□□□□□ -1.31
NEK3P51956 NDUFB9P1-201ENST00000604683 510 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC067838.1-201ENST00000606064 577 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC091768.1-201ENST00000609258 930 ntBASIC6.89□□□□□ -1.31
NEK3P51956 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.89□□□□□ -1.31
NEK3P51956 AL445647.2-201ENST00000615170 130 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC015722.2-201ENST00000622210 551 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.89□□□□□ -1.31
NEK3P51956 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.89□□□□□ -1.31
NEK3P51956 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NEK3P51956 AC067942.1-201ENST00000488045 1493 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
NEK3P51956 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.89□□□□□ -1.31
NEK3P51956 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.89□□□□□ -1.31
NEK3P51956 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NEK3P51956 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.89□□□□□ -1.31
NEK3P51956 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.89□□□□□ -1.31
NEK3P51956 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
NEK3P51956 AL359195.2-201ENST00000623657 4412 ntBASIC6.89□□□□□ -1.31
NEK3P51956 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.89□□□□□ -1.31
NEK3P51956 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NEK3P51956 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
NEK3P51956 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NEK3P51956 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NEK3P51956 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.88□□□□□ -1.31
NEK3P51956 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 SNORD94-201ENST00000386037 137 ntBASIC6.88□□□□□ -1.31
NEK3P51956 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
NEK3P51956 SNORA40.4-201ENST00000390971 128 ntBASIC6.88□□□□□ -1.31
NEK3P51956 AC026310.1-201ENST00000396004 378 ntBASIC6.88□□□□□ -1.31
NEK3P51956 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.88□□□□□ -1.31
NEK3P51956 RNU4-64P-201ENST00000410795 131 ntBASIC6.88□□□□□ -1.31
NEK3P51956 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.88□□□□□ -1.31
NEK3P51956 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.88□□□□□ -1.31
NEK3P51956 AL390879.2-203ENST00000426943 1121 ntBASIC6.88□□□□□ -1.31
NEK3P51956 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.88□□□□□ -1.31
NEK3P51956 AL034369.1-201ENST00000453808 477 ntBASIC6.88□□□□□ -1.31
NEK3P51956 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.88□□□□□ -1.31
NEK3P51956 AC239798.3-201ENST00000454459 408 ntBASIC6.88□□□□□ -1.31
NEK3P51956 RN7SL70P-201ENST00000478322 302 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms