Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA1P49639 RN7SL284P-201ENST00000498823 275 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXA1P49639 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA1P49639 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA1P49639 AC136777.2-201ENST00000522979 358 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA1P49639 OR5M4P-201ENST00000529436 925 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA1P49639 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.44□□□□□ -1.54
HOXA1P49639 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA1P49639 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.44□□□□□ -1.54
HOXA1P49639 AC009852.2-201ENST00000567898 485 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 AC090286.3-201ENST00000573133 187 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA1P49639 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA1P49639 CTSLP2-201ENST00000580501 394 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA1P49639 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HOXA1P49639 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.44□□□□□ -1.54
HOXA1P49639 AC020914.7-201ENST00000594477 545 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 AC113361.1-201ENST00000606683 543 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXA1P49639 AL031777.2-201ENST00000611953 196 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA1P49639 AP002371.2-201ENST00000624450 503 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA1P49639 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA1P49639 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA1P49639 AC020658.2-201ENST00000559030 4020 ntBASIC5.44□□□□□ -1.54
HOXA1P49639 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXA1P49639 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA1P49639 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXA1P49639 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA1P49639 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA1P49639 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
HOXA1P49639 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXA1P49639 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXA1P49639 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXA1P49639 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA1P49639 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA1P49639 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXA1P49639 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXA1P49639 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA1P49639 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA1P49639 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA1P49639 RNU4-81P-201ENST00000363561 144 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 Y_RNA.209-201ENST00000364156 111 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA1P49639 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 RPS3AP5-201ENST00000389400 821 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 AC090114.1-201ENST00000393266 448 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA1P49639 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 KIF4CP-201ENST00000422742 1279 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 HMGN2P27-201ENST00000427352 270 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA1P49639 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA1P49639 GAPDHP14-201ENST00000450472 937 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA1P49639 AL139156.3-201ENST00000454802 394 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 AC004692.1-201ENST00000455430 424 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 RN7SL216P-201ENST00000471607 298 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 RN7SKP11-201ENST00000517018 287 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 AC100854.1-201ENST00000520351 341 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA1P49639 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXA1P49639 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA1P49639 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXA1P49639 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HOXA1P49639 AC122134.1-202ENST00000569111 1201 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 NPM1P45-201ENST00000583151 559 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA1P49639 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 AC004908.1-201ENST00000606572 541 ntBASIC5.43□□□□□ -1.54
HOXA1P49639 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXA1P49639 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXA1P49639 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA1P49639 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXA1P49639 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HOXA1P49639 Z97989.1-201ENST00000531702 2421 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms