Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.92□□□□□ -1.46
RFC3P40938 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFC3P40938 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RFC3P40938 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.91□□□□□ -1.46
RFC3P40938 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 OR11H13P-201ENST00000359695 979 ntBASIC5.91□□□□□ -1.46
RFC3P40938 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.91□□□□□ -1.46
RFC3P40938 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RFC3P40938 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RFC3P40938 RNA5SP431-201ENST00000410312 120 ntBASIC5.91□□□□□ -1.46
RFC3P40938 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 AC108479.1-201ENST00000431142 427 ntBASIC5.91□□□□□ -1.46
RFC3P40938 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.91□□□□□ -1.46
RFC3P40938 AC093166.3-201ENST00000448785 303 ntBASIC5.91□□□□□ -1.46
RFC3P40938 AC063943.2-201ENST00000495697 534 ntBASIC5.91□□□□□ -1.46
RFC3P40938 HMGN1P17-201ENST00000513734 295 ntBASIC5.91□□□□□ -1.46
RFC3P40938 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.91□□□□□ -1.46
RFC3P40938 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.91□□□□□ -1.46
RFC3P40938 NPIPB14P-203ENST00000532298 987 ntBASIC5.91□□□□□ -1.46
RFC3P40938 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 AC092375.1-201ENST00000550410 637 ntBASIC5.91□□□□□ -1.46
RFC3P40938 FXNP1-201ENST00000555153 337 ntBASIC5.91□□□□□ -1.46
RFC3P40938 AC005632.2-201ENST00000564271 828 ntBASIC5.91□□□□□ -1.46
RFC3P40938 AC106785.4-201ENST00000569492 412 ntBASIC5.91□□□□□ -1.46
RFC3P40938 DYNLL1P1-201ENST00000595442 269 ntBASIC5.91□□□□□ -1.46
RFC3P40938 AL157899.1-201ENST00000604110 936 ntBASIC5.91□□□□□ -1.46
RFC3P40938 RPSAP75-201ENST00000605848 301 ntBASIC5.91□□□□□ -1.46
RFC3P40938 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.91□□□□□ -1.46
RFC3P40938 MIR6085-201ENST00000618314 110 ntBASIC5.91□□□□□ -1.46
RFC3P40938 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.91□□□□□ -1.46
RFC3P40938 AP001885.1-201ENST00000621658 558 ntBASIC5.91□□□□□ -1.46
RFC3P40938 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 AC119674.1-204ENST00000641348 1343 ntBASIC5.91□□□□□ -1.46
RFC3P40938 AL359694.2-201ENST00000567753 1615 ntBASIC5.91□□□□□ -1.46
RFC3P40938 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RFC3P40938 IMMTP1-201ENST00000435590 2219 ntBASIC5.91□□□□□ -1.46
RFC3P40938 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 CASC19-228ENST00000641414 1684 ntBASIC5.91□□□□□ -1.46
RFC3P40938 FO082842.1-201ENST00000423552 1370 ntBASIC5.91□□□□□ -1.46
RFC3P40938 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFC3P40938 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.9□□□□□ -1.46
RFC3P40938 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RFC3P40938 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC3P40938 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFC3P40938 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
RFC3P40938 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFC3P40938 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFC3P40938 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFC3P40938 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RFC3P40938 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFC3P40938 AC130360.2-201ENST00000533477 1556 ntBASIC5.9□□□□□ -1.46
RFC3P40938 ASNSP6-201ENST00000592770 1618 ntBASIC5.9□□□□□ -1.46
RFC3P40938 CASC19-246ENST00000641625 1606 ntBASIC5.9□□□□□ -1.46
RFC3P40938 RN7SKP237-201ENST00000364663 301 ntBASIC5.9□□□□□ -1.46
RFC3P40938 MIR188-201ENST00000385034 86 ntBASIC5.9□□□□□ -1.46
RFC3P40938 RBBP4P5-201ENST00000398583 1266 ntBASIC5.9□□□□□ -1.46
RFC3P40938 RN7SKP281-201ENST00000410472 352 ntBASIC5.9□□□□□ -1.46
RFC3P40938 AC002127.1-201ENST00000421305 225 ntBASIC5.9□□□□□ -1.46
RFC3P40938 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC3P40938 Z68868.1-201ENST00000429048 544 ntBASIC5.9□□□□□ -1.46
RFC3P40938 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFC3P40938 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC3P40938 CXCR2P1-202ENST00000443392 1074 ntBASIC5.9□□□□□ -1.46
RFC3P40938 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC3P40938 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC3P40938 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.9□□□□□ -1.46
RFC3P40938 RN7SL362P-201ENST00000494228 267 ntBASIC5.9□□□□□ -1.46
RFC3P40938 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC3P40938 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC3P40938 RN7SKP248-201ENST00000516278 305 ntBASIC5.9□□□□□ -1.46
RFC3P40938 SNORA74.1-201ENST00000516320 180 ntBASIC5.9□□□□□ -1.46
RFC3P40938 CYCSP25-201ENST00000525280 316 ntBASIC5.9□□□□□ -1.46
RFC3P40938 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFC3P40938 OR4A6P-201ENST00000534364 970 ntBASIC5.9□□□□□ -1.46
RFC3P40938 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.9□□□□□ -1.46
RFC3P40938 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.9□□□□□ -1.46
RFC3P40938 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC3P40938 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.9□□□□□ -1.46
RFC3P40938 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms