Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 CDH12P4-201ENST00000517835 295 ntBASIC7.36□□□□□ -1.23
SCN4AP35499 CDH12P3-201ENST00000517935 295 ntBASIC7.36□□□□□ -1.23
SCN4AP35499 CDH12P1-201ENST00000518435 295 ntBASIC7.36□□□□□ -1.23
SCN4AP35499 IGKV1D-22-201ENST00000518953 324 ntBASIC7.36□□□□□ -1.23
SCN4AP35499 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.36□□□□□ -1.23
SCN4AP35499 AC092375.1-201ENST00000550410 637 ntBASIC7.36□□□□□ -1.23
SCN4AP35499 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN4AP35499 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.36□□□□□ -1.23
SCN4AP35499 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.36□□□□□ -1.23
SCN4AP35499 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN4AP35499 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN4AP35499 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN4AP35499 NEK2P2-201ENST00000438441 1338 ntBASIC7.36□□□□□ -1.23
SCN4AP35499 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
SCN4AP35499 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN4AP35499 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN4AP35499 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN4AP35499 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.36□□□□□ -1.23
SCN4AP35499 ZNF812P-201ENST00000457674 1694 ntBASIC7.36□□□□□ -1.23
SCN4AP35499 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN4AP35499 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SCN4AP35499 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN4AP35499 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SCN4AP35499 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SCN4AP35499 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN4AP35499 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN4AP35499 AL139384.2-201ENST00000613809 3590 ntBASIC7.36□□□□□ -1.23
SCN4AP35499 SPATA31C2-201ENST00000324915 3777 ntBASIC7.36□□□□□ -1.23
SCN4AP35499 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.36□□□□□ -1.23
SCN4AP35499 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN4AP35499 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN4AP35499 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SCN4AP35499 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN4AP35499 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.35□□□□□ -1.23
SCN4AP35499 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.35□□□□□ -1.23
SCN4AP35499 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.35□□□□□ -1.23
SCN4AP35499 MAPK10-287ENST00000641217 3037 ntBASIC7.35□□□□□ -1.23
SCN4AP35499 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SCN4AP35499 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC7.35□□□□□ -1.23
SCN4AP35499 SNORA64.1-201ENST00000362600 132 ntBASIC7.35□□□□□ -1.23
SCN4AP35499 RNA5SP234-201ENST00000363916 119 ntBASIC7.35□□□□□ -1.23
SCN4AP35499 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SCN4AP35499 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.35□□□□□ -1.23
SCN4AP35499 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.35□□□□□ -1.23
SCN4AP35499 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.35□□□□□ -1.23
SCN4AP35499 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.35□□□□□ -1.23
SCN4AP35499 PCNAP4-201ENST00000532690 730 ntBASIC7.35□□□□□ -1.23
SCN4AP35499 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.35□□□□□ -1.23
SCN4AP35499 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.35□□□□□ -1.23
SCN4AP35499 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.35□□□□□ -1.23
SCN4AP35499 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.35□□□□□ -1.23
SCN4AP35499 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.35□□□□□ -1.23
SCN4AP35499 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.35□□□□□ -1.23
SCN4AP35499 AL008723.3-201ENST00000608926 449 ntBASIC7.35□□□□□ -1.23
SCN4AP35499 AC012653.2-201ENST00000621880 420 ntBASIC7.35□□□□□ -1.23
SCN4AP35499 AL450226.2-201ENST00000622913 439 ntBASIC7.35□□□□□ -1.23
SCN4AP35499 SAMMSON-227ENST00000642114 1199 ntBASIC7.35□□□□□ -1.23
SCN4AP35499 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
SCN4AP35499 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
SCN4AP35499 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SCN4AP35499 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
SCN4AP35499 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.35□□□□□ -1.23
SCN4AP35499 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.35□□□□□ -1.23
SCN4AP35499 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.35□□□□□ -1.23
SCN4AP35499 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SCN4AP35499 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN4AP35499 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN4AP35499 AL031651.1-201ENST00000615357 1438 ntBASIC7.34□□□□□ -1.23
SCN4AP35499 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SCN4AP35499 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN4AP35499 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
SCN4AP35499 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN4AP35499 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN4AP35499 HMGB1P20-201ENST00000402555 677 ntBASIC7.34□□□□□ -1.23
SCN4AP35499 MIR1286-201ENST00000408112 78 ntBASIC7.34□□□□□ -1.23
SCN4AP35499 RN7SKP125-201ENST00000410481 302 ntBASIC7.34□□□□□ -1.23
SCN4AP35499 AC009237.1-201ENST00000442127 744 ntBASIC7.34□□□□□ -1.23
SCN4AP35499 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SCN4AP35499 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.34□□□□□ -1.23
SCN4AP35499 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.34□□□□□ -1.23
SCN4AP35499 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN4AP35499 AL049840.6-201ENST00000604583 345 ntBASIC7.34□□□□□ -1.23
SCN4AP35499 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN4AP35499 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN4AP35499 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SCN4AP35499 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SCN4AP35499 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SCN4AP35499 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN4AP35499 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.34□□□□□ -1.23
SCN4AP35499 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN4AP35499 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms