Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC011416.1-201ENST00000514947 1732 ntBASIC6.9□□□□□ -1.3
HOXC8P31273 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC8P31273 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC8P31273 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC8P31273 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC8P31273 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HOXC8P31273 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC8P31273 CHEK2P5-201ENST00000423877 246 ntBASIC6.9□□□□□ -1.3
HOXC8P31273 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC8P31273 MTND6P12-201ENST00000428247 522 ntBASIC6.9□□□□□ -1.3
HOXC8P31273 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXC8P31273 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC8P31273 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC8P31273 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC8P31273 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXC8P31273 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HOXC8P31273 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXC8P31273 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXC8P31273 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXC8P31273 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXC8P31273 AC092681.3-201ENST00000609463 678 ntBASIC6.9□□□□□ -1.3
HOXC8P31273 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC8P31273 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC8P31273 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC8P31273 RBMY1HP-201ENST00000382759 1389 ntBASIC6.9□□□□□ -1.31
HOXC8P31273 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
HOXC8P31273 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC8P31273 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC8P31273 AL023806.3-201ENST00000638502 2704 ntBASIC6.9□□□□□ -1.31
HOXC8P31273 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC8P31273 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC8P31273 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
HOXC8P31273 OR4G1P-202ENST00000641173 1788 ntBASIC6.9□□□□□ -1.31
HOXC8P31273 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC8P31273 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
HOXC8P31273 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.9□□□□□ -1.31
HOXC8P31273 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.9□□□□□ -1.31
HOXC8P31273 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HOXC8P31273 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXC8P31273 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 RNFT1P3-201ENST00000340898 1052 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 AC245096.1-201ENST00000413104 546 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXC8P31273 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC8P31273 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC8P31273 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC8P31273 AL391987.1-201ENST00000441025 200 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 AC098847.1-201ENST00000473094 348 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 AC007998.1-201ENST00000474156 672 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC8P31273 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC8P31273 Y_RNA.667-201ENST00000516212 107 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 AC022826.1-201ENST00000519383 805 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXC8P31273 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC8P31273 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC8P31273 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXC8P31273 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC8P31273 AP005119.1-201ENST00000580956 292 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXC8P31273 MIR6809-201ENST00000612189 116 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 RFPL4AP6-201ENST00000616792 846 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 AC245014.3-201ENST00000618589 347 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 AC069542.2-201ENST00000624816 216 ntBASIC6.89□□□□□ -1.31
HOXC8P31273 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXC8P31273 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC8P31273 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXC8P31273 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HOXC8P31273 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC8P31273 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC8P31273 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
HOXC8P31273 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC8P31273 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC8P31273 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HOXC8P31273 MROH3P-201ENST00000435735 2676 ntBASIC6.88□□□□□ -1.31
HOXC8P31273 AC104581.5-201ENST00000624171 7141 ntBASIC6.88□□□□□ -1.31
HOXC8P31273 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC8P31273 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
HOXC8P31273 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC8P31273 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.88□□□□□ -1.31
HOXC8P31273 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC8P31273 AC091305.2-201ENST00000624049 1576 ntBASIC6.88□□□□□ -1.31
HOXC8P31273 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
HOXC8P31273 RNU1-150P-201ENST00000362491 162 ntBASIC6.88□□□□□ -1.31
HOXC8P31273 RNU1-134P-201ENST00000362935 165 ntBASIC6.88□□□□□ -1.31
HOXC8P31273 RN7SKP69-201ENST00000365390 305 ntBASIC6.88□□□□□ -1.31
HOXC8P31273 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC8P31273 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXC8P31273 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.88□□□□□ -1.31
HOXC8P31273 PSMA2P2-201ENST00000504319 686 ntBASIC6.88□□□□□ -1.31
HOXC8P31273 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.88□□□□□ -1.31
HOXC8P31273 SCARNA18.1-201ENST00000516330 83 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms