Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC104629.1-201ENST00000494226 508 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 RN7SL362P-201ENST00000494228 267 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 PCNAP1-201ENST00000505363 709 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 AC091849.1-201ENST00000509920 121 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 HSD3BP3-201ENST00000514706 994 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.69□□□□□ -1.18
CNGA1P29973 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 uc_338.31-201ENST00000615595 186 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 AL354702.2-202ENST00000641481 890 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 AC008691.1-209ENST00000642094 814 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.69□□□□□ -1.18
CNGA1P29973 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.69□□□□□ -1.18
CNGA1P29973 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CNGA1P29973 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.69□□□□□ -1.18
CNGA1P29973 AC083899.2-201ENST00000423285 1376 ntBASIC7.69□□□□□ -1.18
CNGA1P29973 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CNGA1P29973 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
CNGA1P29973 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.68□□□□□ -1.18
CNGA1P29973 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.68□□□□□ -1.18
CNGA1P29973 AC007938.1-201ENST00000562524 2902 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CNGA1P29973 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 RNA5SP435-201ENST00000364044 108 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 RNA5SP77-201ENST00000365394 120 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CNGA1P29973 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 GTF3AP1-201ENST00000416942 1004 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.68□□□□□ -1.18
CNGA1P29973 NAP1L4P2-201ENST00000425958 899 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 GAPDHP59-201ENST00000435908 267 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 MEF2AP1-201ENST00000454867 863 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 RN7SL552P-201ENST00000462094 276 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 AC022336.1-201ENST00000475510 337 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC7.68□□□□□ -1.18
CNGA1P29973 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CNGA1P29973 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.68□□□□□ -1.18
CNGA1P29973 RN7SKP98-201ENST00000517070 156 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CNGA1P29973 TRIM51DP-201ENST00000529746 596 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.68□□□□□ -1.18
CNGA1P29973 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.68□□□□□ -1.18
CNGA1P29973 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 BNIP3P19-201ENST00000605397 577 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 OR51C1P-201ENST00000608504 942 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 AL589743.6-201ENST00000611025 117 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 MIR6862-1-201ENST00000613016 70 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 MIR6862-2-201ENST00000614755 70 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 MIR6729-201ENST00000618194 65 ntBASIC7.68□□□□□ -1.18
CNGA1P29973 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.68□□□□□ -1.18
CNGA1P29973 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.68□□□□□ -1.18
CNGA1P29973 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.68□□□□□ -1.18
CNGA1P29973 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.68□□□□□ -1.18
CNGA1P29973 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CNGA1P29973 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CNGA1P29973 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.68□□□□□ -1.18
CNGA1P29973 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CNGA1P29973 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CNGA1P29973 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.67□□□□□ -1.18
CNGA1P29973 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CNGA1P29973 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CNGA1P29973 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CNGA1P29973 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CNGA1P29973 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.67□□□□□ -1.18
CNGA1P29973 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.67□□□□□ -1.18
CNGA1P29973 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CNGA1P29973 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CNGA1P29973 RNA5SP321-201ENST00000362722 111 ntBASIC7.67□□□□□ -1.18
CNGA1P29973 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.67□□□□□ -1.18
CNGA1P29973 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.67□□□□□ -1.18
CNGA1P29973 RPL36P18-201ENST00000419316 318 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms