Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNA5SP132-201ENST00000364725 118 ntBASIC8.72□□□□□ -1.01
RXRBP28702 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC8.72□□□□□ -1.01
RXRBP28702 STAT4-203ENST00000409995 709 ntTSL 5 BASIC8.72□□□□□ -1.01
RXRBP28702 MTCO2P8-201ENST00000412213 658 ntBASIC8.72□□□□□ -1.01
RXRBP28702 RPL34P19-201ENST00000415903 342 ntBASIC8.72□□□□□ -1.01
RXRBP28702 MORF4L1P6-201ENST00000418771 268 ntBASIC8.72□□□□□ -1.01
RXRBP28702 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC8.72□□□□□ -1.01
RXRBP28702 AC023141.3-201ENST00000436698 278 ntBASIC8.72□□□□□ -1.01
RXRBP28702 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
RXRBP28702 MTCYBP31-201ENST00000438855 1122 ntBASIC8.72□□□□□ -1.01
RXRBP28702 CFL1P4-201ENST00000451536 498 ntBASIC8.72□□□□□ -1.01
RXRBP28702 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 AC066616.1-201ENST00000486795 413 ntBASIC8.72□□□□□ -1.01
RXRBP28702 RPL19P11-201ENST00000495944 589 ntBASIC8.72□□□□□ -1.01
RXRBP28702 AC091435.1-201ENST00000505442 584 ntBASIC8.72□□□□□ -1.01
RXRBP28702 AC027801.3-201ENST00000515049 698 ntBASIC8.72□□□□□ -1.01
RXRBP28702 OR7E13P-201ENST00000526052 910 ntBASIC8.72□□□□□ -1.01
RXRBP28702 AC068339.2-201ENST00000534395 618 ntBASIC8.72□□□□□ -1.01
RXRBP28702 OLR1-210ENST00000544577 924 ntTSL 5 BASIC8.72□□□□□ -1.01
RXRBP28702 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.72□□□□□ -1.01
RXRBP28702 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC8.72□□□□□ -1.01
RXRBP28702 AC106785.3-201ENST00000564064 847 ntBASIC8.72□□□□□ -1.01
RXRBP28702 AP001094.1-201ENST00000579805 193 ntBASIC8.72□□□□□ -1.01
RXRBP28702 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.72□□□□□ -1.01
RXRBP28702 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC8.72□□□□□ -1.01
RXRBP28702 AL049844.2-201ENST00000604280 628 ntBASIC8.72□□□□□ -1.01
RXRBP28702 AC098679.4-201ENST00000624241 654 ntBASIC8.72□□□□□ -1.01
RXRBP28702 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC8.72□□□□□ -1.01
RXRBP28702 LINC02495-203ENST00000636704 242 ntBASIC8.72□□□□□ -1.01
RXRBP28702 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC8.72□□□□□ -1.01
RXRBP28702 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.72□□□□□ -1.01
RXRBP28702 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.72□□□□□ -1.01
RXRBP28702 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC8.72□□□□□ -1.01
RXRBP28702 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.72□□□□□ -1.01
RXRBP28702 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
RXRBP28702 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.72□□□□□ -1.01
RXRBP28702 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.72□□□□□ -1.01
RXRBP28702 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
RXRBP28702 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
RXRBP28702 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
RXRBP28702 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
RXRBP28702 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 RN7SKP23-201ENST00000625159 4301 ntBASIC8.71□□□□□ -1.01
RXRBP28702 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 AC110998.1-201ENST00000519029 2053 ntBASIC8.71□□□□□ -1.01
RXRBP28702 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.71□□□□□ -1.01
RXRBP28702 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.71□□□□□ -1.01
RXRBP28702 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
RXRBP28702 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.02
RXRBP28702 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RXRBP28702 AC006058.1-201ENST00000568686 5067 ntBASIC8.71□□□□□ -1.02
RXRBP28702 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
RXRBP28702 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
RXRBP28702 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.71□□□□□ -1.02
RXRBP28702 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC8.71□□□□□ -1.02
RXRBP28702 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.71□□□□□ -1.02
RXRBP28702 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC8.71□□□□□ -1.02
RXRBP28702 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC8.71□□□□□ -1.02
RXRBP28702 AL606490.8-201ENST00000441624 319 ntBASIC8.71□□□□□ -1.02
RXRBP28702 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.71□□□□□ -1.02
RXRBP28702 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
RXRBP28702 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC8.71□□□□□ -1.02
RXRBP28702 AC108729.2-201ENST00000476543 840 ntBASIC8.71□□□□□ -1.02
RXRBP28702 AC109464.1-201ENST00000511091 819 ntBASIC8.71□□□□□ -1.02
RXRBP28702 AC112198.4-201ENST00000515450 351 ntBASIC8.71□□□□□ -1.02
RXRBP28702 AC034205.1-201ENST00000520621 638 ntBASIC8.71□□□□□ -1.02
RXRBP28702 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.71□□□□□ -1.02
RXRBP28702 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC8.71□□□□□ -1.02
RXRBP28702 MYL6-213ENST00000549017 502 ntTSL 3 BASIC8.71□□□□□ -1.02
RXRBP28702 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC8.71□□□□□ -1.02
RXRBP28702 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC8.71□□□□□ -1.02
RXRBP28702 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC8.71□□□□□ -1.02
RXRBP28702 AC073333.2-201ENST00000603589 769 ntBASIC8.71□□□□□ -1.02
RXRBP28702 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
RXRBP28702 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC8.71□□□□□ -1.02
RXRBP28702 AP000676.4-201ENST00000624659 623 ntBASIC8.71□□□□□ -1.02
RXRBP28702 AC099654.8-201ENST00000637757 681 ntBASIC8.71□□□□□ -1.02
RXRBP28702 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
RXRBP28702 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
RXRBP28702 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
RXRBP28702 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC8.71□□□□□ -1.02
RXRBP28702 AC090771.1-201ENST00000585803 1618 ntBASIC8.71□□□□□ -1.02
RXRBP28702 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
RXRBP28702 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms