Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC7.98□□□□□ -1.13
HOXD8P13378 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 FBP2P1-202ENST00000424473 530 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 MTCYBP3-201ENST00000445588 1137 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 VN1R32P-201ENST00000452234 905 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 Z95152.1-201ENST00000453556 656 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC004815.1-201ENST00000484185 331 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 RPS7P11-201ENST00000484240 586 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 RN7SL350P-201ENST00000492591 299 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC093890.1-201ENST00000502554 540 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.98□□□□□ -1.13
HOXD8P13378 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 NDUFS5P6-201ENST00000529136 295 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC089984.3-201ENST00000552838 363 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC7.98□□□□□ -1.13
HOXD8P13378 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
HOXD8P13378 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
HOXD8P13378 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 AL158062.1-201ENST00000619632 745 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 AC091932.2-201ENST00000623014 291 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 AC079248.2-201ENST00000623779 326 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.98□□□□□ -1.13
HOXD8P13378 AC140479.4-205ENST00000636339 820 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 AC119674.1-201ENST00000641611 1210 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 TPTE2P2-201ENST00000403471 1466 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
HOXD8P13378 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
HOXD8P13378 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
HOXD8P13378 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
HOXD8P13378 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
HOXD8P13378 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.98□□□□□ -1.13
HOXD8P13378 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
HOXD8P13378 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.98□□□□□ -1.13
HOXD8P13378 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 AC092104.1-201ENST00000497346 1441 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC7.97□□□□□ -1.13
HOXD8P13378 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.97□□□□□ -1.13
HOXD8P13378 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.97□□□□□ -1.13
HOXD8P13378 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.97□□□□□ -1.13
HOXD8P13378 CXADRP1-201ENST00000398098 1095 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AC096644.3-201ENST00000416788 338 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.97□□□□□ -1.13
HOXD8P13378 AL133325.1-201ENST00000421090 382 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AC006366.1-201ENST00000422002 759 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 Z99127.2-201ENST00000441426 334 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AC245517.2-201ENST00000442890 346 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 MRPL35P4-201ENST00000453682 566 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 VN1R6P-201ENST00000458417 907 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.97□□□□□ -1.13
HOXD8P13378 EIF4E2P2-201ENST00000492033 736 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AC026414.1-201ENST00000504046 698 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AC092349.1-201ENST00000504903 310 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.97□□□□□ -1.13
HOXD8P13378 PCNPP1-201ENST00000552501 511 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.97□□□□□ -1.13
HOXD8P13378 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.97□□□□□ -1.13
HOXD8P13378 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC7.97□□□□□ -1.13
HOXD8P13378 MTCO3P24-201ENST00000572729 782 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 CBX3P2-202ENST00000583365 535 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 AC015802.2-201ENST00000589690 189 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.97□□□□□ -1.13
HOXD8P13378 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.97□□□□□ -1.13
HOXD8P13378 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.97□□□□□ -1.13
HOXD8P13378 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.97□□□□□ -1.13
HOXD8P13378 AC068802.1-201ENST00000603420 732 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.97□□□□□ -1.13
HOXD8P13378 AC025287.2-201ENST00000621911 668 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 AC011447.6-201ENST00000623510 2598 ntBASIC7.97□□□□□ -1.13
HOXD8P13378 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.97□□□□□ -1.13
HOXD8P13378 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
HOXD8P13378 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
HOXD8P13378 AL390195.2-201ENST00000564771 2023 ntBASIC7.96□□□□□ -1.13
HOXD8P13378 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
HOXD8P13378 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms