Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
TOP2AP11388 AMELX-201ENST00000348912 737 ntTSL 5 BASIC10.63□□□□□ -0.71
TOP2AP11388 NME1P1-201ENST00000420914 382 ntBASIC10.63□□□□□ -0.71
TOP2AP11388 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC10.63□□□□□ -0.71
TOP2AP11388 RPS7P3-201ENST00000443360 580 ntBASIC10.63□□□□□ -0.71
TOP2AP11388 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC10.63□□□□□ -0.71
TOP2AP11388 RN7SL72P-201ENST00000460697 269 ntBASIC10.63□□□□□ -0.71
TOP2AP11388 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC10.63□□□□□ -0.71
TOP2AP11388 AC079395.2-201ENST00000610982 737 ntBASIC10.63□□□□□ -0.71
TOP2AP11388 AC022726.2-201ENST00000634673 547 ntBASIC10.63□□□□□ -0.71
TOP2AP11388 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
TOP2AP11388 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
TOP2AP11388 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
TOP2AP11388 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
TOP2AP11388 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
TOP2AP11388 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
TOP2AP11388 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
TOP2AP11388 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
TOP2AP11388 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC10.62□□□□□ -0.71
TOP2AP11388 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC10.62□□□□□ -0.71
TOP2AP11388 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
TOP2AP11388 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC10.62□□□□□ -0.71
TOP2AP11388 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
TOP2AP11388 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC10.62□□□□□ -0.71
TOP2AP11388 AC235565.1-201ENST00000456962 1325 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 LINC01963-201ENST00000562038 3148 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 RN7SKP128-201ENST00000364270 303 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 RNA5SP478-201ENST00000364657 115 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 CAV1-204ENST00000393470 598 ntTSL 4 BASIC10.62□□□□□ -0.71
TOP2AP11388 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC10.62□□□□□ -0.71
TOP2AP11388 AC007394.1-201ENST00000421941 531 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
TOP2AP11388 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC10.62□□□□□ -0.71
TOP2AP11388 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC10.62□□□□□ -0.71
TOP2AP11388 AC026348.1-201ENST00000462549 1053 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 RNA5SP34-201ENST00000516887 130 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 AP004607.6-201ENST00000525033 1202 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC10.62□□□□□ -0.71
TOP2AP11388 BNIP3P32-201ENST00000600015 554 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC10.62□□□□□ -0.71
TOP2AP11388 AC003992.1-201ENST00000635364 557 ntBASIC10.62□□□□□ -0.71
TOP2AP11388 ATM-229ENST00000639953 587 ntTSL 5 BASIC10.62□□□□□ -0.71
TOP2AP11388 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
TOP2AP11388 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC10.62□□□□□ -0.71
TOP2AP11388 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
TOP2AP11388 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
TOP2AP11388 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
TOP2AP11388 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC10.61□□□□□ -0.71
TOP2AP11388 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
TOP2AP11388 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
TOP2AP11388 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC10.61□□□□□ -0.71
TOP2AP11388 NPM1P4-201ENST00000414095 812 ntBASIC10.61□□□□□ -0.71
TOP2AP11388 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC10.61□□□□□ -0.71
TOP2AP11388 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC10.61□□□□□ -0.71
TOP2AP11388 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC10.61□□□□□ -0.71
TOP2AP11388 EEF1B2P6-201ENST00000445713 673 ntBASIC10.61□□□□□ -0.71
TOP2AP11388 AC006499.3-201ENST00000506077 748 ntBASIC10.61□□□□□ -0.71
TOP2AP11388 AC074087.1-201ENST00000512059 724 ntBASIC10.61□□□□□ -0.71
TOP2AP11388 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC10.61□□□□□ -0.71
TOP2AP11388 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
TOP2AP11388 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC10.61□□□□□ -0.71
TOP2AP11388 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC10.61□□□□□ -0.71
TOP2AP11388 MIR5095-201ENST00000578844 88 ntBASIC10.61□□□□□ -0.71
TOP2AP11388 AP001496.3-201ENST00000580230 913 ntBASIC10.61□□□□□ -0.71
TOP2AP11388 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC10.61□□□□□ -0.71
TOP2AP11388 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
TOP2AP11388 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC10.61□□□□□ -0.71
TOP2AP11388 MELK-211ENST00000545008 2236 ntTSL 2 BASIC10.61□□□□□ -0.71
TOP2AP11388 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
TOP2AP11388 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
TOP2AP11388 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
TOP2AP11388 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
TOP2AP11388 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
TOP2AP11388 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
TOP2AP11388 AC011815.2-201ENST00000618230 2021 ntBASIC10.6□□□□□ -0.71
TOP2AP11388 SALL4P7-201ENST00000555779 3120 ntBASIC10.6□□□□□ -0.71
TOP2AP11388 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC10.6□□□□□ -0.71
TOP2AP11388 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC10.6□□□□□ -0.71
TOP2AP11388 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
TOP2AP11388 YWHAEP1-201ENST00000453697 763 ntBASIC10.6□□□□□ -0.71
TOP2AP11388 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
TOP2AP11388 AC008629.2-201ENST00000503783 483 ntBASIC10.6□□□□□ -0.71
TOP2AP11388 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC10.6□□□□□ -0.71
TOP2AP11388 MIR1273E-201ENST00000581165 102 ntBASIC10.6□□□□□ -0.71
TOP2AP11388 AL021368.3-201ENST00000607119 578 ntBASIC10.6□□□□□ -0.71
TOP2AP11388 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
TOP2AP11388 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC10.6□□□□□ -0.71
TOP2AP11388 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC10.6□□□□□ -0.71
TOP2AP11388 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms