Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
HMGB1P09429 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.01□□□□□ -1.13
HMGB1P09429 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.01□□□□□ -1.13
HMGB1P09429 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.01□□□□□ -1.13
HMGB1P09429 GLYATL1P1-201ENST00000528297 1607 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
HMGB1P09429 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
HMGB1P09429 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 RNU4-39P-201ENST00000362455 127 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 RNU1-55P-201ENST00000365510 158 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 RNA5SP474-201ENST00000391234 90 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 LDHAP5-201ENST00000394996 622 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 AL139135.1-201ENST00000412675 209 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 ELOBP4-201ENST00000423418 296 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC8.01□□□□□ -1.13
HMGB1P09429 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.01□□□□□ -1.13
HMGB1P09429 MTND2P21-201ENST00000436242 1042 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 RPL23AP28-201ENST00000448062 470 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC8.01□□□□□ -1.13
HMGB1P09429 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 ST13P21-201ENST00000453250 1098 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 TPRKBP1-201ENST00000456243 481 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 HESX1-202ENST00000473921 757 ntTSL 5 BASIC8.01□□□□□ -1.13
HMGB1P09429 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC8.01□□□□□ -1.13
HMGB1P09429 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC8.01□□□□□ -1.13
HMGB1P09429 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.01□□□□□ -1.13
HMGB1P09429 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.01□□□□□ -1.13
HMGB1P09429 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.01□□□□□ -1.13
HMGB1P09429 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC8.01□□□□□ -1.13
HMGB1P09429 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.01□□□□□ -1.13
HMGB1P09429 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.01□□□□□ -1.13
HMGB1P09429 AC106785.4-201ENST00000569492 412 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.01□□□□□ -1.13
HMGB1P09429 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 AC104307.1-201ENST00000616142 196 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 AP000577.1-201ENST00000624366 878 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 AC006453.3-201ENST00000635891 377 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 ZNF806-201ENST00000438300 1774 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
HMGB1P09429 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 AL596244.1-201ENST00000567068 3779 ntBASIC8.01□□□□□ -1.13
HMGB1P09429 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.01□□□□□ -1.13
HMGB1P09429 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.01□□□□□ -1.13
HMGB1P09429 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HMGB1P09429 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8□□□□□ -1.13
HMGB1P09429 RACGAP1P-201ENST00000550663 1879 ntBASIC8□□□□□ -1.13
HMGB1P09429 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8□□□□□ -1.13
HMGB1P09429 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
HMGB1P09429 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC8□□□□□ -1.13
HMGB1P09429 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8□□□□□ -1.13
HMGB1P09429 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC8□□□□□ -1.13
HMGB1P09429 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 NPM1P37-201ENST00000403105 874 ntBASIC8□□□□□ -1.13
HMGB1P09429 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8□□□□□ -1.13
HMGB1P09429 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8□□□□□ -1.13
HMGB1P09429 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC8□□□□□ -1.13
HMGB1P09429 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8□□□□□ -1.13
HMGB1P09429 AL592114.2-201ENST00000440142 532 ntBASIC8□□□□□ -1.13
HMGB1P09429 WDR82P2-201ENST00000444540 928 ntBASIC8□□□□□ -1.13
HMGB1P09429 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8□□□□□ -1.13
HMGB1P09429 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8□□□□□ -1.13
HMGB1P09429 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8□□□□□ -1.13
HMGB1P09429 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC8□□□□□ -1.13
HMGB1P09429 HMGB1P3-201ENST00000502802 616 ntBASIC8□□□□□ -1.13
HMGB1P09429 CDH12P2-201ENST00000504393 298 ntBASIC8□□□□□ -1.13
HMGB1P09429 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8□□□□□ -1.13
HMGB1P09429 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC8□□□□□ -1.13
HMGB1P09429 NPM1P35-201ENST00000533043 868 ntBASIC8□□□□□ -1.13
HMGB1P09429 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8□□□□□ -1.13
HMGB1P09429 FCGR1CP-201ENST00000579737 1127 ntBASIC8□□□□□ -1.13
HMGB1P09429 MRPL57P3-201ENST00000619218 176 ntBASIC8□□□□□ -1.13
HMGB1P09429 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8□□□□□ -1.13
HMGB1P09429 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
HMGB1P09429 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 AP000547.3-204ENST00000588548 2523 ntBASIC8□□□□□ -1.13
HMGB1P09429 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
HMGB1P09429 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
HMGB1P09429 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
HMGB1P09429 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.99□□□□□ -1.13
HMGB1P09429 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
HMGB1P09429 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms