Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
HLA-DQB2P05538 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 Z93929.1-201ENST00000418200 1475 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 THEM7P-201ENST00000419556 672 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AC013403.1-201ENST00000436954 263 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AL645936.1-201ENST00000441979 518 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AC005017.1-201ENST00000482002 490 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 RPL34P33-201ENST00000486062 334 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AC095052.1-201ENST00000509955 863 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 SNX18P25-201ENST00000510539 758 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 HMGN1P17-201ENST00000513734 295 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 NATP-201ENST00000523491 878 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 AL137067.2-201ENST00000621202 131 ntBASIC6.31□□□□□ -1.4
HLA-DQB2P05538 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DQB2P05538 SSXP3-201ENST00000442971 1300 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 LCN1P2-201ENST00000372030 223 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AL139805.1-201ENST00000407837 289 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 RN7SKP108-201ENST00000411367 328 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 RPS17P17-201ENST00000419392 409 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC007562.1-201ENST00000421819 517 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC096632.2-201ENST00000438139 1239 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC023274.2-201ENST00000445264 521 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC112187.1-201ENST00000455837 479 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 RPL9P15-201ENST00000491096 532 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 MTND6P8-201ENST00000503471 522 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC036111.2-201ENST00000533247 901 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC004232.2-201ENST00000574245 821 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 RNU4ATAC-201ENST00000580972 127 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AL135999.3-201ENST00000610501 812 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC048341.3-201ENST00000619323 491 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DQB2P05538 USP9YP3-201ENST00000434481 1766 ntBASIC6.3□□□□□ -1.4
HLA-DQB2P05538 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms