Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
P04436 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
P04436 RN7SKP77-201ENST00000363261 353 ntBASIC5.81□□□□□ -1.48
P04436 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.81□□□□□ -1.48
P04436 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
P04436 RAB5CP1-201ENST00000395972 580 ntBASIC5.81□□□□□ -1.48
P04436 RN7SKP144-201ENST00000411108 279 ntBASIC5.81□□□□□ -1.48
P04436 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
P04436 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.81□□□□□ -1.48
P04436 AC112492.2-201ENST00000432774 1030 ntBASIC5.81□□□□□ -1.48
P04436 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 SOCS5P1-201ENST00000440415 949 ntBASIC5.81□□□□□ -1.48
P04436 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 RPL12P31-201ENST00000478433 450 ntBASIC5.81□□□□□ -1.48
P04436 AC017007.3-201ENST00000479865 435 ntBASIC5.81□□□□□ -1.48
P04436 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 AC091874.2-201ENST00000505889 720 ntBASIC5.81□□□□□ -1.48
P04436 IGHV1-14-201ENST00000523391 241 ntBASIC5.81□□□□□ -1.48
P04436 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.81□□□□□ -1.48
P04436 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.81□□□□□ -1.48
P04436 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 AC026826.3-201ENST00000561747 158 ntBASIC5.81□□□□□ -1.48
P04436 AC002519.2-203ENST00000567043 837 ntBASIC5.81□□□□□ -1.48
P04436 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.81□□□□□ -1.48
P04436 AC005332.4-201ENST00000592752 579 ntBASIC5.81□□□□□ -1.48
P04436 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
P04436 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
P04436 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
P04436 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.81□□□□□ -1.48
P04436 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.81□□□□□ -1.48
P04436 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.81□□□□□ -1.48
P04436 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
P04436 AC241584.2-201ENST00000637142 2090 ntBASIC5.81□□□□□ -1.48
P04436 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
P04436 AC105235.1-201ENST00000623208 1816 ntBASIC5.81□□□□□ -1.48
P04436 TNPO1P2-201ENST00000426249 2665 ntBASIC5.81□□□□□ -1.48
P04436 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
P04436 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
P04436 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 AC078880.4-201ENST00000617627 1749 ntBASIC5.8□□□□□ -1.48
P04436 PARP4P1-201ENST00000435945 2337 ntBASIC5.8□□□□□ -1.48
P04436 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
P04436 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.8□□□□□ -1.48
P04436 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
P04436 RNA5SP478-201ENST00000364657 115 ntBASIC5.8□□□□□ -1.48
P04436 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
P04436 AL157702.1-201ENST00000398764 426 ntBASIC5.8□□□□□ -1.48
P04436 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.8□□□□□ -1.48
P04436 AC094019.1-201ENST00000434678 472 ntBASIC5.8□□□□□ -1.48
P04436 AC068491.1-201ENST00000449539 1241 ntBASIC5.8□□□□□ -1.48
P04436 RN7SL104P-201ENST00000498686 293 ntBASIC5.8□□□□□ -1.48
P04436 NPM1P27-201ENST00000502784 830 ntBASIC5.8□□□□□ -1.48
P04436 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 SNX18P24-201ENST00000505249 671 ntBASIC5.8□□□□□ -1.48
P04436 RNA5SP206-201ENST00000516703 121 ntBASIC5.8□□□□□ -1.48
P04436 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.8□□□□□ -1.48
P04436 AC084337.1-201ENST00000524809 686 ntBASIC5.8□□□□□ -1.48
P04436 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.8□□□□□ -1.48
P04436 AC002310.3-201ENST00000569728 723 ntBASIC5.8□□□□□ -1.48
P04436 AC004232.2-201ENST00000574245 821 ntBASIC5.8□□□□□ -1.48
P04436 OR1E3-201ENST00000575608 948 ntBASIC5.8□□□□□ -1.48
P04436 RN7SL475P-201ENST00000583379 298 ntBASIC5.8□□□□□ -1.48
P04436 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.8□□□□□ -1.48
P04436 MIR7159-201ENST00000620587 66 ntBASIC5.8□□□□□ -1.48
P04436 AL357140.4-201ENST00000636827 412 ntBASIC5.8□□□□□ -1.48
P04436 MAPK10-323ENST00000641493 3207 ntBASIC5.8□□□□□ -1.48
P04436 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
P04436 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
P04436 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
P04436 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.8□□□□□ -1.48
P04436 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
P04436 AL049634.1-201ENST00000453770 1720 ntBASIC5.79□□□□□ -1.48
P04436 AC139426.3-201ENST00000605648 2059 ntBASIC5.79□□□□□ -1.48
P04436 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
P04436 ZNF812P-201ENST00000457674 1694 ntBASIC5.79□□□□□ -1.48
P04436 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
P04436 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
P04436 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms