Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
APOBP04114 MIR192-201ENST00000384915 110 ntBASIC3.7□□□□□ -1.82
APOBP04114 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 AC097721.1-201ENST00000427150 1253 ntBASIC3.7□□□□□ -1.82
APOBP04114 AC005297.1-201ENST00000444765 862 ntBASIC3.7□□□□□ -1.82
APOBP04114 AC026826.1-201ENST00000493002 361 ntBASIC3.7□□□□□ -1.82
APOBP04114 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.7□□□□□ -1.82
APOBP04114 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 AL049840.6-201ENST00000604583 345 ntBASIC3.7□□□□□ -1.82
APOBP04114 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 AP002505.2-201ENST00000623585 696 ntBASIC3.7□□□□□ -1.82
APOBP04114 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
APOBP04114 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 AC137056.2-201ENST00000624055 1958 ntBASIC3.7□□□□□ -1.82
APOBP04114 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
APOBP04114 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 AL139415.1-201ENST00000424862 352 ntBASIC3.7□□□□□ -1.82
APOBP04114 AC006466.1-201ENST00000438721 289 ntBASIC3.7□□□□□ -1.82
APOBP04114 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 AC084337.1-201ENST00000524809 686 ntBASIC3.7□□□□□ -1.82
APOBP04114 AC110056.1-201ENST00000525759 911 ntBASIC3.7□□□□□ -1.82
APOBP04114 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.7□□□□□ -1.82
APOBP04114 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC3.7□□□□□ -1.82
APOBP04114 AC127070.3-201ENST00000503695 3263 ntBASIC3.7□□□□□ -1.82
APOBP04114 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 RN7SL97P-201ENST00000486780 299 ntBASIC3.7□□□□□ -1.82
APOBP04114 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.7□□□□□ -1.82
APOBP04114 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 AC104447.1-201ENST00000624214 2124 ntBASIC3.7□□□□□ -1.82
APOBP04114 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBP04114 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBP04114 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBP04114 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
APOBP04114 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.69□□□□□ -1.82
APOBP04114 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.69□□□□□ -1.82
APOBP04114 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.69□□□□□ -1.82
APOBP04114 MRPS21P7-201ENST00000566937 238 ntBASIC3.69□□□□□ -1.82
APOBP04114 AC104785.1-201ENST00000603220 588 ntBASIC3.69□□□□□ -1.82
APOBP04114 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
APOBP04114 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 MAPK10-365ENST00000641902 3825 ntBASIC3.69□□□□□ -1.82
APOBP04114 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
APOBP04114 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
APOBP04114 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
APOBP04114 AL356967.1-201ENST00000406305 431 ntBASIC3.69□□□□□ -1.82
APOBP04114 AC016027.4-201ENST00000450866 277 ntBASIC3.69□□□□□ -1.82
APOBP04114 RPL15P21-201ENST00000495592 567 ntBASIC3.69□□□□□ -1.82
APOBP04114 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC3.69□□□□□ -1.82
APOBP04114 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.69□□□□□ -1.82
APOBP04114 AC063977.5-201ENST00000601044 974 ntBASIC3.69□□□□□ -1.82
APOBP04114 AC068831.8-201ENST00000620171 435 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms