Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.68□□□□□ -1.34
APOEP02649 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
APOEP02649 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
APOEP02649 AC105749.1-201ENST00000631338 2008 ntBASIC6.68□□□□□ -1.34
APOEP02649 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
APOEP02649 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
APOEP02649 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
APOEP02649 SNORD35A-201ENST00000363389 86 ntBASIC6.68□□□□□ -1.34
APOEP02649 RN7SKP250-201ENST00000363924 321 ntBASIC6.68□□□□□ -1.34
APOEP02649 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.68□□□□□ -1.34
APOEP02649 NME1P1-201ENST00000420914 382 ntBASIC6.68□□□□□ -1.34
APOEP02649 AL157884.1-201ENST00000424561 454 ntBASIC6.68□□□□□ -1.34
APOEP02649 AC097721.1-201ENST00000427150 1253 ntBASIC6.68□□□□□ -1.34
APOEP02649 KATNBL1P2-201ENST00000433311 835 ntBASIC6.68□□□□□ -1.34
APOEP02649 VN1R38P-201ENST00000450265 887 ntBASIC6.68□□□□□ -1.34
APOEP02649 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.68□□□□□ -1.34
APOEP02649 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.68□□□□□ -1.34
APOEP02649 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.68□□□□□ -1.34
APOEP02649 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.68□□□□□ -1.34
APOEP02649 BMS1P16-201ENST00000556075 1147 ntBASIC6.68□□□□□ -1.34
APOEP02649 MIR6889-201ENST00000613185 59 ntBASIC6.68□□□□□ -1.34
APOEP02649 AL122023.1-201ENST00000622847 530 ntBASIC6.68□□□□□ -1.34
APOEP02649 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.68□□□□□ -1.34
APOEP02649 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.68□□□□□ -1.34
APOEP02649 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
APOEP02649 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
APOEP02649 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
APOEP02649 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.68□□□□□ -1.34
APOEP02649 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
APOEP02649 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
APOEP02649 AC137056.2-201ENST00000624055 1958 ntBASIC6.68□□□□□ -1.34
APOEP02649 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
APOEP02649 AC018628.1-201ENST00000624147 3819 ntBASIC6.67□□□□□ -1.34
APOEP02649 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
APOEP02649 AC011455.2-201ENST00000599320 3336 ntBASIC6.67□□□□□ -1.34
APOEP02649 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 LINC01613-201ENST00000561476 2780 ntBASIC6.67□□□□□ -1.34
APOEP02649 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
APOEP02649 RNU6-316P-201ENST00000391027 107 ntBASIC6.67□□□□□ -1.34
APOEP02649 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 AC003045.1-201ENST00000398779 713 ntBASIC6.67□□□□□ -1.34
APOEP02649 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.67□□□□□ -1.34
APOEP02649 RPL21P50-201ENST00000417698 477 ntBASIC6.67□□□□□ -1.34
APOEP02649 AC002127.1-201ENST00000421305 225 ntBASIC6.67□□□□□ -1.34
APOEP02649 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 RPSAP32-201ENST00000432681 526 ntBASIC6.67□□□□□ -1.34
APOEP02649 MED28P4-201ENST00000433137 572 ntBASIC6.67□□□□□ -1.34
APOEP02649 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.67□□□□□ -1.34
APOEP02649 EMC3-AS1-205ENST00000438698 534 ntBASIC6.67□□□□□ -1.34
APOEP02649 AC007383.1-201ENST00000445875 636 ntBASIC6.67□□□□□ -1.34
APOEP02649 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 YRDCP3-201ENST00000456507 480 ntBASIC6.67□□□□□ -1.34
APOEP02649 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.67□□□□□ -1.34
APOEP02649 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 RPS27P20-201ENST00000492051 246 ntBASIC6.67□□□□□ -1.34
APOEP02649 RN7SL568P-201ENST00000493069 298 ntBASIC6.67□□□□□ -1.34
APOEP02649 NPM1P27-201ENST00000502784 830 ntBASIC6.67□□□□□ -1.34
APOEP02649 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.67□□□□□ -1.34
APOEP02649 AC106800.3-201ENST00000511389 308 ntBASIC6.67□□□□□ -1.34
APOEP02649 IGKV1D-22-201ENST00000518953 324 ntBASIC6.67□□□□□ -1.34
APOEP02649 AC084337.1-201ENST00000524809 686 ntBASIC6.67□□□□□ -1.34
APOEP02649 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 RN7SL230P-201ENST00000580835 303 ntBASIC6.67□□□□□ -1.34
APOEP02649 WBP1LP12-201ENST00000604449 331 ntBASIC6.67□□□□□ -1.34
APOEP02649 MIR6811-201ENST00000620409 58 ntBASIC6.67□□□□□ -1.34
APOEP02649 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.67□□□□□ -1.34
APOEP02649 NEK2P2-201ENST00000438441 1338 ntBASIC6.67□□□□□ -1.34
APOEP02649 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
APOEP02649 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.67□□□□□ -1.34
APOEP02649 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.66□□□□□ -1.34
APOEP02649 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
APOEP02649 ZNF969P-201ENST00000510345 2341 ntBASIC6.66□□□□□ -1.34
APOEP02649 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.66□□□□□ -1.34
APOEP02649 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.66□□□□□ -1.34
APOEP02649 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
APOEP02649 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
APOEP02649 BX284613.1-201ENST00000452221 1641 ntBASIC6.66□□□□□ -1.34
APOEP02649 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
APOEP02649 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.66□□□□□ -1.34
APOEP02649 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
APOEP02649 RPL11P4-201ENST00000332269 436 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms