Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC006924.1-201ENST00000610750 559 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 AL137067.2-201ENST00000621202 131 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.49□□□□□ -1.21
COL1A1P02452 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.49□□□□□ -1.21
COL1A1P02452 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.49□□□□□ -1.21
COL1A1P02452 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 RARSP1-201ENST00000542842 1418 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
COL1A1P02452 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
COL1A1P02452 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
COL1A1P02452 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.49□□□□□ -1.21
COL1A1P02452 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 ZNF619P1-201ENST00000446539 752 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 FTLP8-201ENST00000446770 267 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 AC005077.1-201ENST00000449226 375 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 MGAT2P1-201ENST00000449718 797 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 ACA64.1-201ENST00000459171 127 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.49□□□□□ -1.21
COL1A1P02452 UBFD1P1-201ENST00000473259 814 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.49□□□□□ -1.21
COL1A1P02452 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC024255.1-201ENST00000614376 102 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 AC022467.1-201ENST00000614738 749 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.49□□□□□ -1.21
COL1A1P02452 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.49□□□□□ -1.21
COL1A1P02452 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
COL1A1P02452 AL359976.1-201ENST00000418655 3528 ntBASIC7.49□□□□□ -1.21
COL1A1P02452 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.48□□□□□ -1.21
COL1A1P02452 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.48□□□□□ -1.21
COL1A1P02452 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
COL1A1P02452 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
COL1A1P02452 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.48□□□□□ -1.21
COL1A1P02452 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
COL1A1P02452 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.48□□□□□ -1.21
COL1A1P02452 RNU1-134P-201ENST00000362935 165 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 U3.25-201ENST00000391209 220 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 GAPDHP75-201ENST00000433910 943 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.48□□□□□ -1.21
COL1A1P02452 AC011742.2-201ENST00000443818 352 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 SUMO2P10-201ENST00000452006 288 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 RPS26P39-201ENST00000469206 341 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 RN7SL193P-201ENST00000491708 276 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 RPS4XP14-201ENST00000493072 781 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.48□□□□□ -1.21
COL1A1P02452 RNA5SP438-201ENST00000516561 112 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.48□□□□□ -1.21
COL1A1P02452 AC092121.1-201ENST00000569452 202 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.48□□□□□ -1.21
COL1A1P02452 RNU4ATAC-201ENST00000580972 127 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.48□□□□□ -1.21
COL1A1P02452 AL352984.2-201ENST00000611153 546 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.48□□□□□ -1.21
COL1A1P02452 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
COL1A1P02452 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
COL1A1P02452 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.47□□□□□ -1.21
COL1A1P02452 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms