Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.29□□□□□ -1.4
LDLRP01130 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 AC020658.2-201ENST00000559030 4020 ntBASIC6.29□□□□□ -1.4
LDLRP01130 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
LDLRP01130 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
LDLRP01130 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.29□□□□□ -1.4
LDLRP01130 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.29□□□□□ -1.4
LDLRP01130 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.28□□□□□ -1.4
LDLRP01130 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.28□□□□□ -1.4
LDLRP01130 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 IMMTP1-201ENST00000435590 2219 ntBASIC6.28□□□□□ -1.4
LDLRP01130 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LDLRP01130 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.28□□□□□ -1.4
LDLRP01130 RNA5SP85-201ENST00000365378 119 ntBASIC6.28□□□□□ -1.4
LDLRP01130 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.28□□□□□ -1.4
LDLRP01130 AC116036.1-201ENST00000412199 367 ntBASIC6.28□□□□□ -1.4
LDLRP01130 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 AC097721.1-201ENST00000427150 1253 ntBASIC6.28□□□□□ -1.4
LDLRP01130 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.28□□□□□ -1.4
LDLRP01130 AC007365.2-201ENST00000428806 458 ntBASIC6.28□□□□□ -1.4
LDLRP01130 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.28□□□□□ -1.4
LDLRP01130 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.28□□□□□ -1.4
LDLRP01130 AC097359.1-201ENST00000447946 463 ntBASIC6.28□□□□□ -1.4
LDLRP01130 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 RPS26P11-201ENST00000463445 348 ntBASIC6.28□□□□□ -1.4
LDLRP01130 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 RN7SL187P-201ENST00000495587 303 ntBASIC6.28□□□□□ -1.4
LDLRP01130 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 RN7SKP67-201ENST00000515905 235 ntBASIC6.28□□□□□ -1.4
LDLRP01130 IGKV2D-38-201ENST00000518423 240 ntBASIC6.28□□□□□ -1.4
LDLRP01130 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.28□□□□□ -1.4
LDLRP01130 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.28□□□□□ -1.4
LDLRP01130 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.28□□□□□ -1.4
LDLRP01130 AC026458.1-201ENST00000564330 438 ntBASIC6.28□□□□□ -1.4
LDLRP01130 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.28□□□□□ -1.4
LDLRP01130 MTATP6P25-201ENST00000574491 261 ntBASIC6.28□□□□□ -1.4
LDLRP01130 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.28□□□□□ -1.4
LDLRP01130 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.28□□□□□ -1.4
LDLRP01130 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 AC012368.3-201ENST00000604190 219 ntBASIC6.28□□□□□ -1.4
LDLRP01130 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.28□□□□□ -1.4
LDLRP01130 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 AL357153.4-201ENST00000620487 1016 ntBASIC6.28□□□□□ -1.4
LDLRP01130 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 CFTRP2-201ENST00000634304 199 ntBASIC6.28□□□□□ -1.4
LDLRP01130 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LDLRP01130 AL451064.2-201ENST00000623514 1654 ntBASIC6.28□□□□□ -1.4
LDLRP01130 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LDLRP01130 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.28□□□□□ -1.4
LDLRP01130 AL359263.1-201ENST00000441188 2796 ntBASIC6.28□□□□□ -1.4
LDLRP01130 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.28□□□□□ -1.4
LDLRP01130 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.28□□□□□ -1.4
LDLRP01130 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
LDLRP01130 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.27□□□□□ -1.41
LDLRP01130 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AP003486.1-201ENST00000525716 3994 ntBASIC6.27□□□□□ -1.41
LDLRP01130 AC092701.1-201ENST00000623627 1551 ntBASIC6.27□□□□□ -1.41
LDLRP01130 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LDLRP01130 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
LDLRP01130 AC090220.1-201ENST00000593078 1699 ntBASIC6.27□□□□□ -1.41
LDLRP01130 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.27□□□□□ -1.41
LDLRP01130 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.27□□□□□ -1.41
LDLRP01130 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LDLRP01130 LCN1P2-201ENST00000372030 223 ntBASIC6.27□□□□□ -1.41
LDLRP01130 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LDLRP01130 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
LDLRP01130 FDPSP5-201ENST00000399474 1057 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms