Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NPIPB1P-202ENST00000588786 828 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 OR7E19P-202ENST00000589942 844 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 AC073046.2-201ENST00000604756 527 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 AC021422.1-201ENST00000621212 473 ntBASIC6.08□□□□□ -1.44
SLC28A1O00337 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.08□□□□□ -1.44
SLC28A1O00337 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.08□□□□□ -1.44
SLC28A1O00337 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SLC28A1O00337 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.08□□□□□ -1.44
SLC28A1O00337 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC28A1O00337 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.08□□□□□ -1.44
SLC28A1O00337 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AC096921.2-201ENST00000561507 1916 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC28A1O00337 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 AL731532.1-201ENST00000623972 4236 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC28A1O00337 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC28A1O00337 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC28A1O00337 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC28A1O00337 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SLC28A1O00337 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 MIR138-2-201ENST00000384916 84 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 SNORA81-201ENST00000408493 178 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 RN7SKP151-201ENST00000410230 316 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 RN7SKP221-201ENST00000410420 301 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 RN7SKP205-201ENST00000410999 307 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC28A1O00337 ELOBP4-201ENST00000423418 296 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC28A1O00337 H3F3BP1-201ENST00000440551 403 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC28A1O00337 TREML3P-201ENST00000457327 501 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 SLC25A51P1-201ENST00000468432 871 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 AC090589.1-201ENST00000473109 362 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AC022616.2-201ENST00000523185 300 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AC009729.1-201ENST00000548873 1133 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC28A1O00337 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AL589863.1-201ENST00000595383 631 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 AL512430.4-201ENST00000603085 613 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AL512413.1-201ENST00000606489 382 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC28A1O00337 AC003992.1-201ENST00000635364 557 ntBASIC6.07□□□□□ -1.44
SLC28A1O00337 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SLC28A1O00337 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC28A1O00337 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SLC28A1O00337 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SLC28A1O00337 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC28A1O00337 AC006600.2-201ENST00000624834 2506 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 KYNUP2-201ENST00000582280 1329 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC28A1O00337 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SLC28A1O00337 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 RNU1-59P-201ENST00000364829 162 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 RNU1-84P-201ENST00000365447 164 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 MIR27A-201ENST00000385073 78 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 AL445238.1-204ENST00000400311 463 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 RPL23AP17-201ENST00000401064 499 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 OR2W4P-201ENST00000406496 926 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 RNA5SP155-201ENST00000411154 129 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AP003385.1-201ENST00000426387 893 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 AC016027.5-201ENST00000427227 210 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AC083855.1-201ENST00000440041 258 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms