Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC3.32□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHKB-CPT1BH3BT56 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHKB-CPT1BH3BT56 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.32□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.32□□□□□ -1.88
CHKB-CPT1BH3BT56 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.32□□□□□ -1.88
CHKB-CPT1BH3BT56 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.32□□□□□ -1.88
CHKB-CPT1BH3BT56 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.32□□□□□ -1.88
CHKB-CPT1BH3BT56 Z82217.1-201ENST00000625157 8149 ntBASIC3.32□□□□□ -1.88
CHKB-CPT1BH3BT56 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RPL11P3-201ENST00000395256 523 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AL359715.1-201ENST00000404330 555 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SKP85-201ENST00000411349 318 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 HYALP1-201ENST00000417674 1279 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 CYP4F30P-202ENST00000420048 405 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC012501.2-201ENST00000437634 1281 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC092610.1-201ENST00000454916 373 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SL12P-201ENST00000473849 290 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC079080.1-201ENST00000479841 822 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SL89P-201ENST00000480252 283 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RPL23AP68-201ENST00000480924 445 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SL472P-201ENST00000492799 293 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 OR7E129P-201ENST00000504655 968 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 IGLV10-67-201ENST00000519446 325 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC007751.2-201ENST00000534173 291 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC024940.3-201ENST00000538551 316 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC137055.1-201ENST00000549333 395 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC106730.2-201ENST00000566641 540 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 ZNF322P1-201ENST00000568013 1209 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC127024.5-201ENST00000580085 462 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RN7SL220P-201ENST00000581978 300 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC061975.3-201ENST00000583209 244 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC00674-202ENST00000590734 160 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC004890.3-201ENST00000605566 1095 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 uc_338.27-201ENST00000611385 169 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AL121890.2-201ENST00000617644 465 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AP001005.3-201ENST00000622049 129 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC015660.5-201ENST00000623238 564 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC022726.2-201ENST00000634673 547 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AC027279.1-201ENST00000568885 4284 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 MAPK10-286ENST00000641208 8747 ntBASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
CHKB-CPT1BH3BT56 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CHKB-CPT1BH3BT56 AKAP10-202ENST00000395536 1815 ntTSL 5 BASIC3.3□□□□□ -1.88
CHKB-CPT1BH3BT56 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CHKB-CPT1BH3BT56 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHKB-CPT1BH3BT56 FBXW7-204ENST00000393956 1735 ntTSL 2 BASIC3.3□□□□□ -1.88
CHKB-CPT1BH3BT56 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms