Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 OR5M2P-202ENST00000641241 4242 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
SRRM4A7MD48 BX284613.1-201ENST00000452221 1641 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 SNX18P3-202ENST00000565670 1750 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 AC006511.3-201ENST00000624929 1783 ntBASIC5.19□□□□□ -1.58
SRRM4A7MD48 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRRM4A7MD48 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC005261.6-201ENST00000623072 1387 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC092634.1-201ENST00000366505 199 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 SNORA70H-201ENST00000383910 135 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 SNORA70J-201ENST00000384182 135 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 U3.43-201ENST00000410734 213 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 MEAF6P1-201ENST00000416092 327 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC007568.1-201ENST00000422912 471 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 MED28P4-201ENST00000433137 572 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 IGHV1-14-201ENST00000523391 241 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 AP005639.1-201ENST00000526939 192 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC092718.4-201ENST00000566639 716 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC090616.1-201ENST00000583895 447 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC009303.3-201ENST00000591103 736 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 QTRT1P1-201ENST00000604344 1078 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 GMCL1P2-201ENST00000605230 823 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 AL512413.1-201ENST00000606489 382 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 Z93930.3-201ENST00000607919 749 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 MIR7854-201ENST00000620068 65 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 AL353684.1-201ENST00000622677 1120 ntBASIC5.18□□□□□ -1.58
SRRM4A7MD48 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRRM4A7MD48 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.18□□□□□ -1.58
SRRM4A7MD48 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SRRM4A7MD48 AL669831.5-218ENST00000591702 1873 ntBASIC5.17□□□□□ -1.58
SRRM4A7MD48 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SRRM4A7MD48 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SRRM4A7MD48 AC004014.2-201ENST00000623718 5122 ntBASIC5.17□□□□□ -1.58
SRRM4A7MD48 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SRRM4A7MD48 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SRRM4A7MD48 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.17□□□□□ -1.58
SRRM4A7MD48 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SRRM4A7MD48 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SRRM4A7MD48 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SRRM4A7MD48 FANCD2P2-201ENST00000437591 1400 ntBASIC5.17□□□□□ -1.58
SRRM4A7MD48 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SRRM4A7MD48 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SRRM4A7MD48 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SRRM4A7MD48 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms