Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 RNU11-6P-201ENST00000391127 133 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 RNU2-18P-201ENST00000411224 162 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AC016908.1-201ENST00000442571 1219 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 CT45A11P-201ENST00000448043 1134 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 HMGB1P7-201ENST00000450921 612 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 RPL37P23-201ENST00000492641 294 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 OR7E99P-201ENST00000505750 922 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 MAST4-IT1-201ENST00000514241 658 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AC084121.1-201ENST00000533882 835 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AC107958.1-201ENST00000556576 290 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 MRPS21P8-201ENST00000569196 235 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AC137695.1-201ENST00000604126 489 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 MIR7109-201ENST00000613748 65 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AL450226.2-201ENST00000622913 439 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 OR7A1P-202ENST00000641542 1158 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AP003486.1-201ENST00000525716 3994 ntBASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
YJEFN3A6XGL0 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 LINC01616-201ENST00000561816 2280 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 RN7SKP237-201ENST00000364663 301 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 SNORA43.1-201ENST00000364863 140 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 RNA5SP431-201ENST00000410312 120 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 RN7SKP144-201ENST00000411108 279 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 TRGV5P-201ENST00000419915 354 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 PSMD10P2-201ENST00000432890 672 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 RPL5P7-201ENST00000444235 813 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 GAPDHP23-201ENST00000444823 993 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 RPS27AP3-201ENST00000453803 454 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AC122718.2-201ENST00000505325 591 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AP001823.1-201ENST00000604056 1003 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AC024589.2-201ENST00000605642 1294 ntBASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
YJEFN3A6XGL0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
YJEFN3A6XGL0 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
YJEFN3A6XGL0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
YJEFN3A6XGL0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
YJEFN3A6XGL0 AC027575.3-201ENST00000583058 2747 ntBASIC6.5□□□□□ -1.37
YJEFN3A6XGL0 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
YJEFN3A6XGL0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.5□□□□□ -1.37
YJEFN3A6XGL0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
YJEFN3A6XGL0 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
YJEFN3A6XGL0 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms