Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AL078624.2-201ENST00000605063 554 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 HDAC1P2-201ENST00000453661 1398 ntBASIC6.43□□□□□ -1.38
TCRBV7S3A2A0A539 AC096921.2-201ENST00000561507 1916 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AL445238.1-204ENST00000400311 463 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 RN7SKP221-201ENST00000410420 301 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 RN7SKP205-201ENST00000410999 307 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 MEAF6P1-201ENST00000416092 327 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AL589794.1-201ENST00000424971 390 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 VPS25P1-201ENST00000455691 508 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 COL6A4P2-205ENST00000509855 506 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AC026688.1-201ENST00000520639 1168 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AC103968.1-201ENST00000557841 573 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 PRELID3BP3-201ENST00000584963 545 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AC005332.4-201ENST00000592752 579 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AP005131.7-201ENST00000610087 611 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AL162377.2-201ENST00000624532 337 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AL356094.1-201ENST00000624663 1212 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 AC125238.2-201ENST00000430003 1440 ntBASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
TCRBV7S3A2A0A539 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 HMGA1P8-201ENST00000414130 321 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AP003385.1-201ENST00000426387 893 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 BMS1P11-201ENST00000442351 885 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 BMS1P9-201ENST00000457640 885 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC073594.1-201ENST00000462065 364 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AP002371.1-201ENST00000463604 433 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC025181.1-201ENST00000477507 416 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 RPL5P33-201ENST00000487833 905 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 MTND6P8-201ENST00000503471 522 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 SLC25A51P2-201ENST00000535708 889 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AL731537.2-201ENST00000561565 951 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC007494.1-201ENST00000562293 760 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 NPIPB1P-202ENST00000588786 828 ntBASIC6.41□□□□□ -1.38
TCRBV7S3A2A0A539 AC012175.1-201ENST00000603755 531 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms